Gene RPB_3158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3158 
Symbol 
ID3910959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3614344 
End bp3614829 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content66% 
IMG OID637885060 
Producthypothetical protein 
Protein accessionYP_486765 
Protein GI86750269 
COG category[S] Function unknown 
COG ID[COG5500] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGA CCCTCGTCAC AGCCCTGCTG TGGTTCGGCG CGATCGGCTG CGGCCTGATG 
GCCGGGGTGT ATTTCGCATT CTCGACCTTC GTGATGACCG CGCTGGCGCG GCTGCCGAGG
GCGTCCGGCA TCGCCGCGAT GAACGCCATC AACACCGAGA TCGTCCGCTC GCCTTTCCTG
CCGCTGTTCT TCGGCACCAC CCTGGCCGCG GCCGCGCTGG CGGTGGTCGG CGCACTGCAC
TGGAGCGAAC CAGGCGCCAC GGCGATGGTC GCCGGCGGCG TGATCTACGT GCTCGGCATG
TTCGTCGTGA CGATCGTCCG CAACGTGCCG CTCAACACCA CGCTGGCCGC AGCTGATCCG
GAGAGTGTGG CTGCGGCTGA GTTGTGGGCT GCTTATGTGC GGGATTGGAC GTGGTGGAAC
CACGTGCGAA CGGTGGCGTC GACGGTGGCG TGCGGGTTGT TGATTGTGGG ACCATCAGTC
GGATAA
 
Protein sequence
MTQTLVTALL WFGAIGCGLM AGVYFAFSTF VMTALARLPR ASGIAAMNAI NTEIVRSPFL 
PLFFGTTLAA AALAVVGALH WSEPGATAMV AGGVIYVLGM FVVTIVRNVP LNTTLAAADP
ESVAAAELWA AYVRDWTWWN HVRTVASTVA CGLLIVGPSV G