Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3136 |
Symbol | |
ID | 3910937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 3584160 |
End bp | 3585611 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637885038 |
Product | succinic semialdehyde dehydrogenase |
Protein accession | YP_486743 |
Protein GI | 86750247 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.362143 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGATGC CGAGTGATCC TGGCCTGTTG GCCGAGCGCT GCCTGATTGG CGGCAAATGG TGTGGTGAGC CGGTCGATGC TGTGTTCAAC CCGGCGACGG GCGAGCGCAT CGGCGCGGTG CCGCACTTCG GTGCGGACGA GGCCGACGAG GCGGTTCGCG CCGCCGGGCT TGCATTCCGG CAGTGGTCGA AGCTGCTGGC GAAACAGCGC GCGGCGATGC TGCGCGGCTG GTTCGATCAG ATCATCGCCC ATCGCGACGA TCTCGCACGG CTGCTGACGT CGGAGCAGGG CAAGCCGCTC GCCGAGGCAC TGGGTGAAAT CGACTATGCG GCATCGTTCG TCGAGTTCTA TGCCGAAGAG GCGCGCCGCA TTTACGGCGA GACGATTCCG GCGCACCGCG CCGATTCCAG AACCATGGTG ATCCGTCAGC CGGTCGGCGT CGTCGCGGCG ATCACGCCGT GGAATTTTCC GGCCGCGATG ATCACTCGCA AAGTGGCGCC GGCGCTCGCC GCCGGCTGCA CGGTGGTGAT CAAGCCGGCG CCGGAAACGC CGCTGACGGC GCTTGCACTG GGCGTGCTGG CGCAGCGCGC AGGGTTTCCG GCAGGCGTGC TCAACATCAT CACCGGCGAC GCGCCTGCGA TCGGCAAGGC GTGGACCGAG CATCCGACGG TGCGGGCGAT CAGCTTCACC GGCTCCACCG AGGTCGGCAA GATCCTGATG CGGCAGGCCG CGTCGACCGT GAAGAAGGTC GGGCTCGAGC TCGGCGGCAA TGCGCCGTTC ATCGTGTTCG ACGATGCAGA TCTCGACGCC GCGGTCGACG GCGTGATCGC CTCGAAGTTT CGCAACATGG GGCAGACCTG CGTCTGTGCC AACCGGATCT ACGCGCAGAA CGGGATCTAC GACGCCTTCG TCGAGAAGCT CGCCGCCAAG GTTGCCACGT TGCGGGTCGG CAACGGACTC GACGACGGCG TCACTCAGGG GCCGCTGATC ACCAAGGAGG CGGTGGCCAA GGTCGAGCAT CATCTCGCCG ACGCCGTCGC CAAGGGGGCC AAGATCGTGC TCGGCGGCAA GCGTCATGCG CTCGGACAAA CTTTCTTCGA GCCGACCGTC GTCACCGGCG TCACCGCCGA CATGGTCGTC ACGCGCGAGG AGACCTTCGG TCCGGTCGCT CCGGTGTATC GCTTCCGCGG CGAAGCCGAC GTGATCGCGC AGGCCAACGA CTCGCCGTTC GGACTGGCGG CGTATTTTTA CGCCCGCGAC CTCGGCCGGG TGTTCAGGGT CGCCGAAGCG CTGGAGTCCG GGATGGTCGG CGTCAATTCG GCGCTGCTCG GAGCCGACGT GGTGCCGTTC GGCGGCGTCA AGGAATCCGG CCTCGGCCGC GAAGGCTCGC GCCACGGCAT CGAGGAATAT GTCGAGACCA AATACATCCT GCTCGGCGGT CTCGATCGCT GA
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Protein sequence | MLMPSDPGLL AERCLIGGKW CGEPVDAVFN PATGERIGAV PHFGADEADE AVRAAGLAFR QWSKLLAKQR AAMLRGWFDQ IIAHRDDLAR LLTSEQGKPL AEALGEIDYA ASFVEFYAEE ARRIYGETIP AHRADSRTMV IRQPVGVVAA ITPWNFPAAM ITRKVAPALA AGCTVVIKPA PETPLTALAL GVLAQRAGFP AGVLNIITGD APAIGKAWTE HPTVRAISFT GSTEVGKILM RQAASTVKKV GLELGGNAPF IVFDDADLDA AVDGVIASKF RNMGQTCVCA NRIYAQNGIY DAFVEKLAAK VATLRVGNGL DDGVTQGPLI TKEAVAKVEH HLADAVAKGA KIVLGGKRHA LGQTFFEPTV VTGVTADMVV TREETFGPVA PVYRFRGEAD VIAQANDSPF GLAAYFYARD LGRVFRVAEA LESGMVGVNS ALLGADVVPF GGVKESGLGR EGSRHGIEEY VETKYILLGG LDR
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