| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3133 |
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| Symbol | |
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| ID | 3910934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3579560 |
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| End bp | 3581149 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637885035 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_486740 |
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| Protein GI | 86750244 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.362143 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGAC GCGAATTCAC CAAGCTCGGC CTGCTGGCCG GCGCGGCCGG CATCGGCGGC
ATTCCGCTCG GCATCACCCG GGCGGTGGGG CAAACCCGCG GCGGCACGCT CAACACCATC
ATTCAGCCGG AGCCGCCGAT CCTGGTCACC GCGCTCAACC AGCAGCAGCC GACGCTGACG
CTCGGCGGCA AGATCTACGA AAGCCTGCTG CGCTACGATT TCGATCTCAA GCCGCTGCCC
GGCCTGGCGC AGTCCTGGGA AGTGTCGCCC GACAAGCTGA CCTATACATT CAAGCTGCAT
CCCAACATCA CCTTCCACGA CGGCGCGCCG CTGACGTCCG AAGACGTGGT GTTCTCGATC
ATGAAGGTGC TGATCGAGAA CCACGCCCGC GCGCGCAACA CGTTCTCGCG CGTCGAGAAG
GCCGAGGCGC CGGATCCGCT GACCGTGGTG TTCAAACTGA AGGCGCCGTT CGCGCCGTTC
CTCACCGCGT TCGACTGCAC CACGGCCCCG ATCGTGCCGA AGCATATTTA CGAAGGCACG
GACTATCGCA AGAACCCGGC CAATGCGAAG GCGATCGGCT CGGGTCCGTT CAAGCTGAAG
GAATGGGTGC GCGGTTCGCA CGTCCATCTG GTCAAGCACG AAGGCTATTA TCGCCCGGGC
GAGCCGGTTC TCGACGAGAT TATCTATCGG GTCATCCCGG ACTCGGCGTC GCGCTCGGTG
GCGCTGGAGC AGGGGACCGT GCAGCTCACG CAATGGACCG ACGTCGAACT GTTCGAGGTG
CCGCGGCTGT CCAAGCTGCC GCATCTGACG ATGACCACCA AGGGCTACGA ATTCTTCGCC
CCCCATACGT GGCTCGAGTT CAACACCCGG ATCGCGCCGA TGAACGACAA GCGGTTCCGG
CAGGCGGTGA TGTATGCGAT CGACCGCAAG GCGTTGCTGG CCCGCATCTA TTTCGGTCTC
GGCAAGGTCG CGACCGGCCC GGTGTCGTCG AAGACCAAAT TCTACGAGAA GAACGTCAAG
GCCTACGACT TCTCGCCCGA GAAGGCGAAG GCTCTGCTCG ACGAGATGGG GCTGAAGCCG
GGTGCCGACG GCAAGCGCGT GACGATTCCC TATCTCGTGC CGCCCTACGG TGAAACGCAT
CAACGGACCT CCGAATTCAT TCGCCAGTCG CTCGCCCGCG TCGGCATCGA CCTGCAACTC
CAGGGGATCG ATGTCGCCGG ATGGGCCGAG AAGTTCAGCA ACTGGGACTT CTCGATGACG
GCGACCACGG TCTATCAGTT CGGCGATCCG GCGCTCGGCG TGTCACGGAG TTATGTCTCC
TCCAACATCC GCAAGGGCAT TCTGTTCTCC AACACCTGCG GCTACTCCAA TCCGGAGGTC
GACCGGCTGT TCGAGGAGGC CGCGGTCGCG ACCTCGGACG ACAAGCGCCA GGAGTTCTAC
AGCGAGGTTC AGAAGATCAT GGTCGAGGAC GTGCCGGTCG CCTGGCTGCT CGAGATCGAC
TATCCGAACT TCATGGACAA ACGTCTGAAG AACGTGGTGA CGACGGCGAT CGGCGTGCAC
GACACGTTCG GGACGGTTTC GTTCGGATGA
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| Protein sequence | MNRREFTKLG LLAGAAGIGG IPLGITRAVG QTRGGTLNTI IQPEPPILVT ALNQQQPTLT
LGGKIYESLL RYDFDLKPLP GLAQSWEVSP DKLTYTFKLH PNITFHDGAP LTSEDVVFSI
MKVLIENHAR ARNTFSRVEK AEAPDPLTVV FKLKAPFAPF LTAFDCTTAP IVPKHIYEGT
DYRKNPANAK AIGSGPFKLK EWVRGSHVHL VKHEGYYRPG EPVLDEIIYR VIPDSASRSV
ALEQGTVQLT QWTDVELFEV PRLSKLPHLT MTTKGYEFFA PHTWLEFNTR IAPMNDKRFR
QAVMYAIDRK ALLARIYFGL GKVATGPVSS KTKFYEKNVK AYDFSPEKAK ALLDEMGLKP
GADGKRVTIP YLVPPYGETH QRTSEFIRQS LARVGIDLQL QGIDVAGWAE KFSNWDFSMT
ATTVYQFGDP ALGVSRSYVS SNIRKGILFS NTCGYSNPEV DRLFEEAAVA TSDDKRQEFY
SEVQKIMVED VPVAWLLEID YPNFMDKRLK NVVTTAIGVH DTFGTVSFG
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