Gene RPB_3094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3094 
Symbol 
ID3910895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3526178 
End bp3527038 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content67% 
IMG OID637884998 
Productcarbon-monoxide dehydrogenase 
Protein accessionYP_486703 
Protein GI86750207 
COG category[C] Energy production and conversion 
COG ID[COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.630321 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCCG CGGCTTTCGA CTATCACGCT CCCACCACGA TCGCGGAGGC GCTGGTGCTG 
CTCGAACAGC ACGGCAGCGA CGCGCGGCTG CTGGCCGGCG GCCAGACGCT GCTGCCGATG
ATGAATTTTC GCCTGGTCGC GCCCGAAGTG GTGATCGATC TCAACCGGAT TCCCGACCTC
GCCTTCATCG AAGCCGACGG CAGGCATGTC CGGATCGGCG CGATGACGCG GCAGCGCGCA
TTGGAGTTCT CGCCCGTCAT CGCGCGTGAC CTTCCGCTGC TGCACGAGGC CATCAAGATG
GTCGGCCATC TCCCCACCCG CTCGCGCGGG ACGATCGGCG GGTCGCTCGC CAATGCGGAT
TCCTCCGCCG AGATTCCGAT GGTGCTGCAG GTGCTGGAGG GCGAGATGCT GGTGCGAGGA
CCGCACGGCG AACGAACCAG CTCCGCGGCC GATTTCGTGG TCGATGCCAT GACCACGAGC
CTGGCCGAGC ACGAGATGCT CGTCGAAATC CGCGTGCCTG TGATGCCGCA AGGAGCGCGG
TTTGCGGTCG AGGAATTCTC GCGACGGCGC GGAGATTTCG CGATCGCAGC GGTGGCCGCG
ATGGTGGTGA TGCAGGATGG CATTTGCCGG AGTACGCGAC TGGCGACCGC CGGCGTGTCG
CCGGCTTCGA GCCGCCTGCG CGCAGCCGAG CAATTGCTCG AAGGCACAGC GCTCGACGAG
GCAGCGATCG AGCGCGCCGC AAAGGCCGCC TCCGAGGCCG TCGAACCAAG TGCCGATCGC
AACGGCAGCG AACGCTATCG CCGGCACCTC ACCAAGGTGC TGACCAGGCG GGTGTTGCAG
CGCGCCAAAC AACAAGCCTG A
 
Protein sequence
MKPAAFDYHA PTTIAEALVL LEQHGSDARL LAGGQTLLPM MNFRLVAPEV VIDLNRIPDL 
AFIEADGRHV RIGAMTRQRA LEFSPVIARD LPLLHEAIKM VGHLPTRSRG TIGGSLANAD
SSAEIPMVLQ VLEGEMLVRG PHGERTSSAA DFVVDAMTTS LAEHEMLVEI RVPVMPQGAR
FAVEEFSRRR GDFAIAAVAA MVVMQDGICR STRLATAGVS PASSRLRAAE QLLEGTALDE
AAIERAAKAA SEAVEPSADR NGSERYRRHL TKVLTRRVLQ RAKQQA