Gene RPB_3016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3016 
Symbol 
ID3910815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3439495 
End bp3440262 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content64% 
IMG OID637884922 
ProductDSBA oxidoreductase 
Protein accessionYP_486629 
Protein GI86750133 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.517861 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.845616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCGT TCCGTCCGTT TGCCGCCGCC CTGCTCGCGC TCTTGTTGGT CGGCGCGCCA 
GTTGCCGCCG CGGCGCAGAA ATTCTCCGAC GAGCAGCGCA GCCAGATCGA ACAGATCATC
AAGGACTATC TGGTGTCTCA CCCCGAGGTG CTGGAAGAAG CGTCCGACGA ATTGGGCAAG
CGGCAGGCCA ACGCCGCGGC CGAAAAGCAC CAGGCCGCGA TCAAGGACAA CGCCGAAGCG
ATCTTCAATT CGCCGCGCGG CATCACGCTC GGCAACAAGG ACGGCGACGT CACCTTCGTC
GAATTCTTCG ATTACAATTG CGGCTACTGC AAGCGCGCGA TGACCGACAT GATCGCGCTG
ATGAAGGAAG ATCCCAAGCT CAAGATCGTG CTGAAGGAAT TTCCGGTGCT CGGCCCGCCC
TCGGTCGAGG CGGCGCAGGT TGCGATCGCG GTGCGGATGC AGACTCCCGA TGGTAAGAAG
TATCTCGACT TCCACCAGAA GCTGATGGGC GGCCGCGGTC AGGCCGACAA GGCCCGCGCG
ATGGCGGCCG CCAAGGAGGC CGGCTTCGAC ATGGCCCGGC TCGAGAAGGA CATGGCGAGC
CCGGAAGTCC GCGCCACCAT CGAGGAGAGC TTCAAGCTCG CCGAAGCGAT GGGCATGAAC
GGCACGCCGA GCTACGTGAT CGGCAAGCAG GTGGTGGTCG GCGCAGTCGG CCTCGACACG
CTGCGCCAGA AGGTGGCGCT CGCCCGCTGC GGCAAGGAGA AGTGCTGA
 
Protein sequence
MPSFRPFAAA LLALLLVGAP VAAAAQKFSD EQRSQIEQII KDYLVSHPEV LEEASDELGK 
RQANAAAEKH QAAIKDNAEA IFNSPRGITL GNKDGDVTFV EFFDYNCGYC KRAMTDMIAL
MKEDPKLKIV LKEFPVLGPP SVEAAQVAIA VRMQTPDGKK YLDFHQKLMG GRGQADKARA
MAAAKEAGFD MARLEKDMAS PEVRATIEES FKLAEAMGMN GTPSYVIGKQ VVVGAVGLDT
LRQKVALARC GKEKC