Gene RPB_3011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3011 
Symbol 
ID3910810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3434436 
End bp3434999 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content72% 
IMG OID637884917 
ProductBioY protein 
Protein accessionYP_486624 
Protein GI86750128 
COG category[R] General function prediction only 
COG ID[COG1268] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.131178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.563491 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTGGC CGCAGCGCGC GGGACAGTCC GCAGCCATTT GGCGCGCGAT CGCCCTGATC 
GCCGTCGGCG CCGTGCTTCT GACCGCCTCG GCGAAATTCA ACCTGCCGTT GCCGCTGGTG
CCGATGACCC TTCAAACGCT GGTGGTCTTG CTGATCGGCG CGGCCTATGG CGCGCGGTTG
GGTGGTGCGA CCGTGCTGGC CTATCTGGCC GCGGGGGCGC TCGGCCTGCC GGTGTTCGCC
GGACCGGCCG GCGGTCTGGC GCCGTTGACG GGGCCGACAG CCGGGTATCT GGCGGGCTTC
GTCGCCGCCG CCGTCGTCGT CGGTTGGTTC GCCGAACGGG GCTGGGATCG CTCCGTGCCC
AGGCTGTTCG TGGCGATGGC GCTCGGTCAC ATCGCGATCC TTGCGCTCGG CTTCGGCTGG
CTCGCTTACG GCCTGCATCT CGGCGCGGCG AAGGCGTGGT CGGTGGGCGT GGTTCCCTTC
CTCGCGGGGG CGCTGGTCAA GAACGCGCTC GGCGCGGCGA TGCTGCCCAC GGTCCGGCGG
CTGGCCGACG GCCGGCGAGG GTGA
 
Protein sequence
MLWPQRAGQS AAIWRAIALI AVGAVLLTAS AKFNLPLPLV PMTLQTLVVL LIGAAYGARL 
GGATVLAYLA AGALGLPVFA GPAGGLAPLT GPTAGYLAGF VAAAVVVGWF AERGWDRSVP
RLFVAMALGH IAILALGFGW LAYGLHLGAA KAWSVGVVPF LAGALVKNAL GAAMLPTVRR
LADGRRG