| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2990 |
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| Symbol | |
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| ID | 3910789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3403472 |
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| End bp | 3404758 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637884896 |
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| Product | SufS subfamily cysteine desulfurase |
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| Protein accession | YP_486603 |
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| Protein GI | 86750107 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.398941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.104458 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCACT GCTGCGATCG CTCTCGAGTT GGAAGGCCTG ACATGGCGCA TCCCGCGGTT
TCGAATGGGT CCTACGACGT CGCCAAAGTC CGCGAGGATT TTCCGGCGCT GGCGCTGAAG
GTTTACGGCA AGGATCTGGT GTATCTCGAC AACGCCGCCT CGGCGCAGAA GCCGCGCGCC
GTGCTGGAGC GGATGACCAA GGCGTATGAG AGCGAATACG CCAATGTGCA TCGCGGGCTG
CATTATCTCG CCAACGCGGC GACCGAAGCC TATGAGGGCG GTCGCACCCG CGTGCAGCAT
TTCCTCAACG CCAAGCGGCC GGAAGAGATC ATCTTCACCC GCAACGCCAC CGAGGCGATC
AATCTGGTGG CGTCGTCGTT CGGCGCGCCG AATATCGGCG AGGGCGACGA GATCGTGCTC
TCGATCATGG AGCACCATTC CAACATCGTG CCGTGGCACT TCTTGCGCGA ACGTCAGGGT
GCTGTTCTCA AATGGGCGCC GGTCGACGAC GACGGCAATT TCCTGATCGA CGAATTCGAG
AAGCTGCTGT CGCCGAAGAC CAAGCTGGTC GCGATCACGC AGATGTCGAA CGCGCTCGGC
ACCATCGTGC CGGTGAAAGA GGTGGTGAAG CTGGCGCACG ACCGCGGCAT TCCGGTGCTG
GTCGACGGCA GCCAGGGCGC GGTGCATCTC ACCATCGACG TCCAGGACAT CGACTGCGAT
TTCTACATCA TGACCGGCCA CAAGCTGTAC GGCCCGACCG GGATCGGCGT GCTGTACGGC
AAATACGACG TCCTCGCCAA GATGCGGCCG TTCAACGGCG GCGGCGAGAT GATTCGCGAA
GTGGCGCAGG ACTGGGTGAC CTACGGCGAC CCGCCGCACC GGTTCGAGGC CGGCACCCCG
GCGATCGTCG AGGCGGTCGG GCTCGGGGCG GCGATCGACT ACGTCAATTC GATCGGCAAG
GAGCGCATCG CCGCGCACGA ACACGATCTT TTGACGTATG CGGAACAGCG ATTGCGCGAG
ATCAATTCGC TGCGCATCAT CGGCACCGCC AAGGGCAAGG GGCCGGTGAT TTCCTTCGAG
ATGAAGGGCG CGCACCCGCA CGACATCGCC ACCGTGATCG ACCGCCAGGG CATCGCGGTG
CGGGCGGGAA CCCATTGCGT GATGCCGTTG CTGGAGCGGT TCCAGGTCAC GGCGACGTGC
CGGGCGTCGT TCGGCATGTA TAATACCCGT GAGGAAGTCG ACCAACTCGC TAATGCGCTG
ATCAAGGCGC GGGACCTGTT CGCATGA
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| Protein sequence | MRHCCDRSRV GRPDMAHPAV SNGSYDVAKV REDFPALALK VYGKDLVYLD NAASAQKPRA
VLERMTKAYE SEYANVHRGL HYLANAATEA YEGGRTRVQH FLNAKRPEEI IFTRNATEAI
NLVASSFGAP NIGEGDEIVL SIMEHHSNIV PWHFLRERQG AVLKWAPVDD DGNFLIDEFE
KLLSPKTKLV AITQMSNALG TIVPVKEVVK LAHDRGIPVL VDGSQGAVHL TIDVQDIDCD
FYIMTGHKLY GPTGIGVLYG KYDVLAKMRP FNGGGEMIRE VAQDWVTYGD PPHRFEAGTP
AIVEAVGLGA AIDYVNSIGK ERIAAHEHDL LTYAEQRLRE INSLRIIGTA KGKGPVISFE
MKGAHPHDIA TVIDRQGIAV RAGTHCVMPL LERFQVTATC RASFGMYNTR EEVDQLANAL
IKARDLFA
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