Gene RPB_2977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2977 
Symbol 
ID3910776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3388811 
End bp3389341 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content67% 
IMG OID637884883 
Producthypothetical protein 
Protein accessionYP_486590 
Protein GI86750094 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.200606 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAG CATTTCGCGG CCTCATCGAT TTCGTGCGCG AGCACCAGGC CTGGGCCGCG 
CCGGTGGTGC TGGTGCTGGC GTTCGGGGAA TCGCTCGCCT TCATCTCGCT GGTGGTGCCG
GCCTGGGGCG CGCTGGTGGC GATCGGCGCG CTGGTCGGCG CCAGCGGCAT CAGTTTCTGG
CCGGTGTGGC TCGGCGCTGC GCTCGGTGCC TCGCTTGGCG ATTGGCTGTC GTACTGGTTC
GGCTATCGCT ACAAGGACAG CGTCGCCCAG ATGTGGCCGC TGTCGAAGTT CCCCGGGCTG
CTGCTGCGCG GCGAGGACTT CGTGCAGAAA TGGGGGGTGC CGAGCATCTT CATCGGCCGC
TTCTTCGGGC CGCTGCGCGC CTCGGTGCCG CTCGCGGCGG GCATCTTCGA GATGCCGTAT
TGGCATTTCC AGATCGCCAA TGTGCTGTCG GCGCTGGTGT GGTCGGCGGT GCTGCTGCTG
TTCGGCGATG CGCTGTCGAT CGGAGCGAAC TGGCTGGTGC GGTCGATCTG A
 
Protein sequence
MEEAFRGLID FVREHQAWAA PVVLVLAFGE SLAFISLVVP AWGALVAIGA LVGASGISFW 
PVWLGAALGA SLGDWLSYWF GYRYKDSVAQ MWPLSKFPGL LLRGEDFVQK WGVPSIFIGR
FFGPLRASVP LAAGIFEMPY WHFQIANVLS ALVWSAVLLL FGDALSIGAN WLVRSI