Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2954 |
Symbol | |
ID | 3910753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 3363230 |
End bp | 3364321 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637884860 |
Product | hypothetical protein |
Protein accession | YP_486567 |
Protein GI | 86750071 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1509] Lysine 2,3-aminomutase |
TIGRFAM ID | [TIGR00238] KamA family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.583634 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGGG TCACACGATT GCAAACGCCC GCCGCCACAA CACTGCGGCA ACCCTCTGAG CTGATCGCGC AAGGTCTCGC GCCGGCGGAG TCGCGCGACG ATCTCGAACA GGTCGCGGCA CGCTACGCGA TCGCGGTGAC GCCCGATGTC GCGGCGCTGA TCGATCCGAA CGATCCCCAC GATCCGATCG CGCGGCAATA CATCCCGCGT GCCGACGAAC TCGTCACGCT GCCGATCGAG CGCGACGATC CGATCGGCGA CGGCGCCCAT GCGCCGGTCG AGGGCATCGT GCATCGCCAC CGCGACCGCG TGCTGCTGAA GCTGGTGCAT GTCTGCGCGG TGTATTGCCG GTTCTGTTTC CGCCGCGAGA CGATCGGCCC CGGCAAGGAC AACGCGCTGT CGCGCGAGGC GACCGCGGCG GCGCTCGACT ACATCCGGGC CCACCCGGAA ATCTGGGAGG TGATCTTCAC CGGCGGCGAT CCGTTGATGC TGTCGCCGCG CCGGATGGCC GAGATCATGG CCGAACTGGC GACCATCGCG CACGTCAAGA TCATCCGCTT CCACACCCGC GTGCCGGTTG CCGATCCTGC GCGGATCACG CCGGAGCTGG TGCGGGCGTT GCAGACACCC GGGAAAACCA CCTGGGTCGC GCTTCACGCC AACCACCCGC GCGAGCTCAC CGCGGCTGCG CGCGCCGCGT GTGCGATGCT GATAGATGCC GGGATTCCGA TGGTCAGCCA GTCGGTGCTG TTGCGCGGTG TGAACGATGA TTCGGAGACG CTGGAAGCCT TGATGCGCGG CTTCGTCGAA TGCCGGATCA AGCCGTATTA TCTGCATCAC GGCGACCTCG CGCCGGGCAC CGCGCATCTG CGCACCACGA TCGCGGAAGG GCAGGCGCTG ATGCGGGCGC TGCGCGGCCG CGTCTCCGGC CTGTGCCAGC CGGAATACGT GCTCGACATT CCCGGCGGCT ACGGCAAGGC GCCGATCGGT CCGAACTATT TGACGGGCGA GGATGGAACA GTCGCGGATT CGCGCTATCG TGTCCGCGAC TATTGCGGTG ACGTCCATCT CTATCCGCCC GGCTCGTGCT GA
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Protein sequence | MSRVTRLQTP AATTLRQPSE LIAQGLAPAE SRDDLEQVAA RYAIAVTPDV AALIDPNDPH DPIARQYIPR ADELVTLPIE RDDPIGDGAH APVEGIVHRH RDRVLLKLVH VCAVYCRFCF RRETIGPGKD NALSREATAA ALDYIRAHPE IWEVIFTGGD PLMLSPRRMA EIMAELATIA HVKIIRFHTR VPVADPARIT PELVRALQTP GKTTWVALHA NHPRELTAAA RAACAMLIDA GIPMVSQSVL LRGVNDDSET LEALMRGFVE CRIKPYYLHH GDLAPGTAHL RTTIAEGQAL MRALRGRVSG LCQPEYVLDI PGGYGKAPIG PNYLTGEDGT VADSRYRVRD YCGDVHLYPP GSC
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