| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2886 |
|---|
| Symbol | |
|---|
| ID | 3910680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 3286695 |
|---|
| End bp | 3287330 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637884787 |
|---|
| Product | CinA-like |
|---|
| Protein accession | YP_486499 |
|---|
| Protein GI | 86750003 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1546] Uncharacterized protein (competence- and mitomycin-induced) |
|---|
| TIGRFAM ID | [TIGR00199] competence/damage-inducible protein CinA C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCA ACGACGCCCG CACCGATTCC CGTGCCTTGG CCCGCTCGTT GCTCGACCTC
TGCCGCTCGC GCAAGCTCAC CATCGCCACG GCTGAATCCT GCACCGGCGG CTTGGTCGCC
GGCGCCCTCA CCGACATCCC CGGCTCGTCC GACGTGATCG ACCGCGGCTT CGTCACCTAT
TCGAACGAAG CCAAGCACGA CATGCTCGGC GTCGAGACCG CGACGCTCAC CACCTTCGGC
GCCGTCAGCA AGGAGACTGC GCTGGCGATG GCGGTCGGCG CGCTGGAGCA TGCCGACGTC
GATCTGGCGG TGTCGATCAC CGGCATCGCC GGCCCCGGCG GCGCGACCCC GGGCAAGCCG
GTCGGGCTTG TGCATTTTGC GGTGGCGGCG CGCGACGGCC GCATCACCCA TCGCGAGCAG
CGCTTCGGCG CGATCGGCCG CAGCAATGTG CGTCAGCGTT CCGTCGTCGA AGCATTGCGG
ATGCTGCTGG AGGTCGCACG CGGCCCAAAG CCGGCGGTGA AGGCGAAGCG CACAGCCGCC
ACCGGCCTGC ACAAACGCGT CGCCCGCTCG CCGAGGCGCA CCGCCGCCAG CAAGCGCGTG
CCGCCGAAGC GGCCGGTCAA GCCGAAGAAG ACTTAG
|
|---|
| Protein sequence | MSGNDARTDS RALARSLLDL CRSRKLTIAT AESCTGGLVA GALTDIPGSS DVIDRGFVTY
SNEAKHDMLG VETATLTTFG AVSKETALAM AVGALEHADV DLAVSITGIA GPGGATPGKP
VGLVHFAVAA RDGRITHREQ RFGAIGRSNV RQRSVVEALR MLLEVARGPK PAVKAKRTAA
TGLHKRVARS PRRTAASKRV PPKRPVKPKK T
|
|---|
| |