| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2885 |
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| Symbol | |
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| ID | 3910679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 3285487 |
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| End bp | 3286692 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637884786 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_486498 |
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| Protein GI | 86750002 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.451878 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAAAC CTCCCCGTAC CGCCGCCATC ATCGTCGCCG CCGGCCGCGG CCTCCGCGCT
GGCGCGGGCG GCCCCAAACA ATACCGCACG CTCGCCGGAC GGCCGGTGAT TGCCAGGGCT
TTGCAGCCGT TTTGTACGCA CCCGGAGGTC TTTGCGGTCC AGCCCGTGAC CAATCCGGAC
GACACCGCGA CGTTCAACGA GGCGGTCGCC GGGCTCGATT TCCGACCTGC GGTCGGTGGC
GGCGCGACCC GGCAGGCGTC GGTTCGCGCC GGGCTGGAAG CGCTGGCCGA ACTGAACCCC
GACATCGTGC TGATCCACGA CGCGGCGCGT CCCTTTGTCA CGCCGGATCT GATCTCGCGT
GCGATCGTCG CGGCCGGCCA GACCGGCGCG GCGCTGCCGG TGATCGCGGT CAACGACACC
GTCAAGCAGG TCGATGCCGA GGGCTGCGTC GTGGCGACGC CGGACCGCGC GCAATTGCGG
ATCGCGCAGA CGCCGCAGGC CTTCCGTTTC GACGTGATTC TCGACGCGCA CCGCCGCGCC
GCGCGCGATG GTCGCGATGA CTTCACCGAC GACGCCGCGA TCGCCGAATG GGCGGGATTG
ACGGTGTCCA CGTTCGAGGG CGATGCTGCC AACATGAAAC TGACCACGCC GGAAGACTTC
TCGCGCGAAG AGAGCCGCCT CACCGCGGCG CTCGGCGACA TCCGCACCGG CACCGGCTAC
GACGTCCACG CCTTCGGCGA CGGCGATCAC GTCTGGCTGT GCGGGCTGAA GGTGCCGCAC
AATCGCGGCT TCCTGGCGCA TTCCGACGGC GACGTCGGAC TGCACGCGCT GGTCGACGCC
ATCCTCGGCG CGCTGGCCGA CGGCGACATC GGCTCGCACT TCCCGCCGAC CGACCCGCAA
TGGAAGGGCG CGGCCTCCGA CAAGTTCCTG AAATACGCGG TCGACCGCGT CGCCGCGCGC
GGCGGCCGCA TCGCCAATCT CGAAGTGACG ATGATCTGCG AGCGGCCGAA GATCGGCCCG
CTGCGCGACC CGATGCGGCA GCGCATCGCC GAGATCACCG GCGTTCCGGT GTCGCGCGTC
GCCGTGAAGG CGACCACCAG CGAGCGGCTC GGCTTCACCG GCCGCGAGGA AGGCATCGCC
GCCACCGCGT CGGCCACCAT CCGGCTGCCT TGGTCCCCTT GGGGCGCCGA AGGACAGGCC
TCCTGA
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| Protein sequence | MQKPPRTAAI IVAAGRGLRA GAGGPKQYRT LAGRPVIARA LQPFCTHPEV FAVQPVTNPD
DTATFNEAVA GLDFRPAVGG GATRQASVRA GLEALAELNP DIVLIHDAAR PFVTPDLISR
AIVAAGQTGA ALPVIAVNDT VKQVDAEGCV VATPDRAQLR IAQTPQAFRF DVILDAHRRA
ARDGRDDFTD DAAIAEWAGL TVSTFEGDAA NMKLTTPEDF SREESRLTAA LGDIRTGTGY
DVHAFGDGDH VWLCGLKVPH NRGFLAHSDG DVGLHALVDA ILGALADGDI GSHFPPTDPQ
WKGAASDKFL KYAVDRVAAR GGRIANLEVT MICERPKIGP LRDPMRQRIA EITGVPVSRV
AVKATTSERL GFTGREEGIA ATASATIRLP WSPWGAEGQA S
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