| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2881 |
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| Symbol | |
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| ID | 3910675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3279161 |
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| End bp | 3281449 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637884782 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_486494 |
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| Protein GI | 86749998 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0943385 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCG CAGAGACGTC GACCCCAACC GTTGACGACC CGTCGATCGC CGAGCCGCGC
GCCGCCTTCT GGCGCCGGCT GCTGGCGCCG ATCGCGGTGT GCGTGGCGCT GCTGTCGGCC
TTCCTCACCT TCGTCATCCT GACCGGACTG ACGCCGATTG CGCCCACCCG GGCCGTCGTC
GTCACCTTCC TGCTGATCAA CGGCGCCACC ATCCTGCTGC TGGTGGCGAT CATCGTCCGC
GAGGTCTGGA AGATCATCCA GGCCCGGCGG CGCGGACGGG CGGCGGCGCG GCTCCACGTC
CAGATCGTCA GCCTGTTCTC GGTGATCGCC GTGCTGCCGG CGGTGCTGGT GTCGGTCGTC
GCCAATGTCA CGCTCGACCG CGGCCTCGAC CGGCTGTTCT CAGGGCCGAC CCGGGCGGTG
ATCCAGAATT CGCTGATCGT CGCCAATGCC TATCTGCACG AACACGGCCA GCTGATCCGC
GGCGACATCA TCGGCATGGC GAACGACATC TCGCGGGTCC GGCCGCTGTT CGACCAGGAC
CGCAAGTCCT TCCGCGAATT TCTCACCACC GATGCCGCGT CGCGCAATCT TCCCGGCGCG
ATGCTGATCG ACAAGGACCG CAACATCGTG GAGTCGGCCC AGACCGGCAT CCAGCGCGAT
TTCGACACGC CGGCCCCCGA ATTCCTCAGC AATGTCGACG ACACCGAGCC GCAGATCGCG
GTGTTCATCG AGGCCAATTA CGTCGCCGCG GTGATCCGGC TGAAGGGCTT CGACGACACC
TTCCTGTATG TCGCGCGGCT GCTCGACCCC CGCGTGGTGG CGCAATTGCG GCAGACCCAG
GCCAGCGTCG CCGAATATGC CGAGATCGAG GCGCGCCGGC TCGGCGTTCA GGTCGCGTTC
GCGCTGATGT TCACGGTGAT CGCGCTGACG GTGCTGATGT CGTCGGTGCT GATCGGGCTG
AACTTCGCCA ATTGGCTGGT GGCGCCGATC CGCCGCCTGA TGGGCGCGGC GCAGATGGTC
TCGACCGGCG ATCTGCACGT CCAGGTGCCG GTGTTCAAAT CCGAGGGCGA CCTGTCGCAA
CTCGGCGAGA CTTTCAACAA GATGACGCAG GAGCTGCGGA CCCAGCGCGA CGAACTGGTC
AGCGCCAGCG ATCTGATCGA CAGTCGCCGC CGCTTCATCG AAGCGGTGCT GTCGTCGGCC
AGCGCCGGCA TCATCGGCGT CGACGGCTCG CTCAGCATCG GCATTCTCAA CCGCTCGGCG
GAGAAGCTGA TCGGGCATTC GGAATCCGAG ACGCTGGGGC ATCCGCTGTC CGAGGTGATT
CCCGAGCTCG ACGAAATGAT GGCCGCGGCC TGCGAAGGCG CGCAGCGTCT GGTGCAGGGC
CAGATCACCA TCACCCGCGA TGGCCGCGAA CGCATTCTCT CGGTGCGCGT CACGGCCGAG
CAGACCGGCC ACGCCCGCGA CAGCTACATC ATCACGCTCG ACGATATCAC CGAGCTGGTG
TCGGCGCAGC GGACCTCGGC CTGGGGCGAT GTCGCGCGCC GGATCGCGCA CGAGATCAAG
AACCCGCTGA CCCCGATCCA GCTGTCGGCG GAGCGGATCA AGCGCAAGTT CGGCAAGGTG
ATCGTCGAGG ACAAGGGCAT CTTCGAGCAG TGCACCGACA CCATCGTGCG CCAGGTCGAC
GACATCCGCC GCATGGTCGA CGAATTCTCG CGCTTCGCGC GGATGCCGAA GCCGGTAATC
GAAGGCGAGG ATGTCGCCGA CACCGTGCGC CAGGTGGTGT TCCTGATGCG CGTCGGCCAT
CCCGAGGTCG AGATCGAGAC CGAGATCAAG GACGACCCGC TGCGGGCGCG GTTCGACCGC
CGTCTGATTT CGCAGGCGTT GACCAACATC ATCAAGAACG CGGCCGAGGC GATCGAGGCG
GTGCCGCCGG AGGAACTCGG CAAGGGCAGG ATCGAGGTGG TGGCGGCGCG CGACGGCGAC
GACGTCGTCA TCGACGTCGT CGACAACGGC ATCGGTCTGC CCAAACAAAG CCGCTCACGC
CTGCTCGAAC CCTACGTGAC CACGCGCGAG AAGGGCACCG GCCTCGGGCT CGCGATCGTC
GGGCGCGTGC TGGTCGATCA TGGCGGCGGC ATCGAACTCA ACGACGCATC CGACTTCCGG
CCCGGGCAAC GTGGCGCGTG GATGCGGTTA CGATTTGCGA TGTCCGGACA GCCCGTGGCA
CCGCCTGCCG GTGAACCAAA AGCCAAGGCC GGCAACGAAC CGAAGATAGA AGCGGCGAAC
AGCGGCTAG
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| Protein sequence | MTSAETSTPT VDDPSIAEPR AAFWRRLLAP IAVCVALLSA FLTFVILTGL TPIAPTRAVV
VTFLLINGAT ILLLVAIIVR EVWKIIQARR RGRAAARLHV QIVSLFSVIA VLPAVLVSVV
ANVTLDRGLD RLFSGPTRAV IQNSLIVANA YLHEHGQLIR GDIIGMANDI SRVRPLFDQD
RKSFREFLTT DAASRNLPGA MLIDKDRNIV ESAQTGIQRD FDTPAPEFLS NVDDTEPQIA
VFIEANYVAA VIRLKGFDDT FLYVARLLDP RVVAQLRQTQ ASVAEYAEIE ARRLGVQVAF
ALMFTVIALT VLMSSVLIGL NFANWLVAPI RRLMGAAQMV STGDLHVQVP VFKSEGDLSQ
LGETFNKMTQ ELRTQRDELV SASDLIDSRR RFIEAVLSSA SAGIIGVDGS LSIGILNRSA
EKLIGHSESE TLGHPLSEVI PELDEMMAAA CEGAQRLVQG QITITRDGRE RILSVRVTAE
QTGHARDSYI ITLDDITELV SAQRTSAWGD VARRIAHEIK NPLTPIQLSA ERIKRKFGKV
IVEDKGIFEQ CTDTIVRQVD DIRRMVDEFS RFARMPKPVI EGEDVADTVR QVVFLMRVGH
PEVEIETEIK DDPLRARFDR RLISQALTNI IKNAAEAIEA VPPEELGKGR IEVVAARDGD
DVVIDVVDNG IGLPKQSRSR LLEPYVTTRE KGTGLGLAIV GRVLVDHGGG IELNDASDFR
PGQRGAWMRL RFAMSGQPVA PPAGEPKAKA GNEPKIEAAN SG
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