| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2880 |
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| Symbol | |
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| ID | 3910674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3277776 |
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| End bp | 3279143 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637884781 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_486493 |
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| Protein GI | 86749997 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.765557 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAATG ACATTTTGAT CGTCGATGAC GAAGCGGATA TCCGCGATCT CGTCGCCGGC
ATTCTCGAGG ACGAAGGCTT CACGTCGCGC ACCGCGCGCG ACAGCGATTC CGCGTTGGCG
GAGATCGCGA ACCGGCGTCC GAATTTGATC TTCCTCGACA TCTGGCTGCA GGGCAGCAAG
CTCGACGGCC TGCAGTTGCT CGAGCAGATC AAGAAGGAGC ACGCCGAGGT GCCGGTGGTG
ATGATCTCCG GCCACGGCAA CATCGAGACC GCGGTGGCGG CGATCAAACG CGGCGCCTAC
GACTTCATCG AGAAGCCGTT CAAATCCGAC CGCCTGCTTC TGGTCGCGAC GCGTGCGCTG
GAGACCTCGC GGCTGAAACG CGAGGTGCGC GAACTGAAGC AGCAGGCGCC GTCGGCCTCG
ACGCTGATGG GCCGCTCGGC CTGCATGAAC CAGTTGCGCC AGACCATCGA GCGCGCCGCC
AAGGCCAACA GCCGGATTCT GATCGTCGGC CCGTCGGGGG CCGGCAAGGA ACTCGCGGCG
CGGACGCTGC ACAACGCCTC CGGCCGCGCC GATGGCCCGT TCGTGGTGAT CAACGCCGCC
GCGATCACGC CGGAGCGGAT GGAGGTCGAG CTGTTCGGCA TCGAGCCGAA CGGCGAGCAC
GCGCGCAAGG CGGGAGCGCT GGAAGAGGCC CATGGCGGCA CGCTGTTCAT CGACGAAATC
GCCGACATGC CGCGCGAGAC CCAGAACAAG ATCCTGCGGG TGCTGGTCGA GCAGACCTTC
CAGCGCTCCG GCGGCACCGC CAAGGTCAAT GTCGACGTTC GCATCATCTC GTCGACGGCG
CGCAATCTCG AAGAGGAGAT CGCCGAGGGA CGCTTCCGCG AGGACCTGTA TCACCGGCTG
TCGGTGGTGC CGATCCGGGT GCCGCCGCTG TCGGAACGGC GCGAGGACAT TCCCGAATTG
ATCGAGTATT TCATGGACCA GATTTCGGCA GCGACCGGCC TGCCGAAGCG GCAGATCGGG
CAGGATGCGA TGGCCGTGCT GCAGTCGCAT GTCTGGCCGG GCAACGTCCG TCAGCTCCGC
AACAATGTCG AGCGGGTGAT GATCCTCGCC GGCGGCGGCC CGGATGCGGT GATCACCGCC
GACATGCTGC CGCAGGACGT CGGCTCGATG GTGCCGACGA TGCCGACCGG CAACAATGGC
GAGCACATCA TGGGGCTGCC GCTGCGCGAG GCCCGCGAGG TGTTCGAGCG CGACTACCTC
ATCGCGCAGA TCAGCCGGTT CTCCGGCAAC ATCTCGCGCA CCGCCGAATT CGTCGGCATG
GAGCGCTCGG CGCTGCATCG CAAGCTCAAG GCGCTCGGCG TCGGCTGA
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| Protein sequence | MANDILIVDD EADIRDLVAG ILEDEGFTSR TARDSDSALA EIANRRPNLI FLDIWLQGSK
LDGLQLLEQI KKEHAEVPVV MISGHGNIET AVAAIKRGAY DFIEKPFKSD RLLLVATRAL
ETSRLKREVR ELKQQAPSAS TLMGRSACMN QLRQTIERAA KANSRILIVG PSGAGKELAA
RTLHNASGRA DGPFVVINAA AITPERMEVE LFGIEPNGEH ARKAGALEEA HGGTLFIDEI
ADMPRETQNK ILRVLVEQTF QRSGGTAKVN VDVRIISSTA RNLEEEIAEG RFREDLYHRL
SVVPIRVPPL SERREDIPEL IEYFMDQISA ATGLPKRQIG QDAMAVLQSH VWPGNVRQLR
NNVERVMILA GGGPDAVITA DMLPQDVGSM VPTMPTGNNG EHIMGLPLRE AREVFERDYL
IAQISRFSGN ISRTAEFVGM ERSALHRKLK ALGVG
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