Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2858 |
Symbol | |
ID | 3910651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 3257608 |
End bp | 3259284 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637884758 |
Product | putative beta (1-6) glucans synthase |
Protein accession | YP_486471 |
Protein GI | 86749975 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG5309] Exo-beta-1,3-glucanase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.178086 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTTGG CAGATTGCCT GCGAGCGGGT AATCGACGGT CATTCTGGAG GACGGAACCC ATTTCTTTTC GCACGCCGCT GGCGCTTCTC CCGATTTCTC TCGGCATCAT CTTCGGCGTC TGGTGGTGGA TCGCCACGCC GGTCGATCTG GCGCGCGCGC CGATCGATCC GAACGACAAG CTCGAATGCG TTTCTTATGC GCCGTTCCGT GGCGCGCAGA CGCCGCTCGA TCCGACGACG CAGATCGGCG CCGACCAGAT CGAGCAGGAT CTGACGCAGC TCGCCAAGAT ATCCAAATGC GTGCGCACTT ACTCGGTCGA CAACGGCCTC GAAAAACTGC CGGCGATCGC CGGCAAGGTC GGGCTGAAGG TGCTGCAGGG CATCTGGCTC GGCAACGAGC GCGCCAAGAA CCTGGCGCAG ATCGCCGTCG CCGTCGGTCT CGCCAAGGAC TATCCGGATG TCATCAGTTC ACTGGTAGTC GGCAACGAAG TGCTGTTGCG CGGCGAGATG ACCGCGGGCG ATCTCGCCGC GACGATTCGT CTGGTGAAGT CGCAGGTGAA GACGCCCGTG ACCTACGCGG ATGTCTGGGA ATACTGGCTG CGTCATCGCG AGATCTACGA GGCGGTCGAT TTCGTCACGA TCCACATCCT GCCGTATTGG GAAGACCTGC CGATTCGCGC GCGCAATGCC GCCGCGCACG TCGATCAGAT TCGCAAGCGC GTCGCGGTCG CATTCCCGGC CAAGGAAATC CTGATCGGCG AGACCGGCTG GCCGAGCGCG GGACGGATGC GCGAGGGCGC GCTGCCGTCG CGCACCAACC AGGCGCGGGT CGTGTCGGAA ATTCTGGGGC TCGCCAAGGC GGAGAACTTT CGCGTCAACC TGATCGAAGC CTACGATCAG CCGTGGAAGC GCGATCTCGA GGGCACGGTC GGTGGTTACT GGGGCCTGAT CGACGCCGAC AATCGCGCGC TGAAGTACCC GGCAGGTGTG CCGATCAGCA ATTTCCCGCA GTGGAAATTG TCGATGGCCG CCGGCATGGC GCTCAGCCTG GTGGTGTTTG CGACCGCGAT GCTGACGCTG CGGCGCAGGC CCTGGGCGCC GCGGCTGGCC GCCTGGCTCG CCGTGGGGGT GTCGGCGACA GCGGGCGGCG TGCTGCTCGG CATCGCCGTC GACAAGATGC TGGTGGAGAG CTACGGCTGG GGCCGCTGGC TGCAATGGGG ATTGCTGCTG GCGAGCGGCG TGCTGACGCC GATTCTGGCG GCGCATGCGC TGATGGTGGG CCGGGCGGTC CCGACCTTCC TCGAACTGTT CGGCCCGCTG GAGCAGCGCA ACCGATCGTT CCTGACCTAT GCGCTCGGTT TGTCGGTCGT GGTGACCACG CTGATCGGCG CCCAGACCGC GCTCGGCTTC ACCTTCGATC CGCGCTATCG CGATTTCCCG TTCGCGTCGT TGACGATGGC GGTGCTGCCG CTGTTCCTGT TGATGCTGCT GAACCGTCCG CAGCAGGGCG CGCGGCCGAT CGCCGAGGCG GTGTTCGCCG GGGTGTTCGC GGTCTGCGCG CTTTACATCG TCTTCAACGA AGGGCCGAAG AACTGGCAGT CGCTGTGGAC CTGCGCGGTG TACGCGATGC TGGCGCTTAC GCTGTGGCGG GCGCGGGTCG TGCAAATCCC AAAATAA
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Protein sequence | MPLADCLRAG NRRSFWRTEP ISFRTPLALL PISLGIIFGV WWWIATPVDL ARAPIDPNDK LECVSYAPFR GAQTPLDPTT QIGADQIEQD LTQLAKISKC VRTYSVDNGL EKLPAIAGKV GLKVLQGIWL GNERAKNLAQ IAVAVGLAKD YPDVISSLVV GNEVLLRGEM TAGDLAATIR LVKSQVKTPV TYADVWEYWL RHREIYEAVD FVTIHILPYW EDLPIRARNA AAHVDQIRKR VAVAFPAKEI LIGETGWPSA GRMREGALPS RTNQARVVSE ILGLAKAENF RVNLIEAYDQ PWKRDLEGTV GGYWGLIDAD NRALKYPAGV PISNFPQWKL SMAAGMALSL VVFATAMLTL RRRPWAPRLA AWLAVGVSAT AGGVLLGIAV DKMLVESYGW GRWLQWGLLL ASGVLTPILA AHALMVGRAV PTFLELFGPL EQRNRSFLTY ALGLSVVVTT LIGAQTALGF TFDPRYRDFP FASLTMAVLP LFLLMLLNRP QQGARPIAEA VFAGVFAVCA LYIVFNEGPK NWQSLWTCAV YAMLALTLWR ARVVQIPK
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