| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2822 |
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| Symbol | |
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| ID | 3910615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3216724 |
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| End bp | 3217947 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637884722 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_486435 |
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| Protein GI | 86749939 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.321736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.516899 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCAG TCCCTTTGAA AAATACCGAC GCCGCCCATG ATGGTGTGCG CAGCATCAGC
GTCCTCGGCG CCACCGGGTC GATCGGCGAC AGCACGATGG ACCTGCTGCG CGCGGCGCCG
GAGAAGTACC GGGTCGAGGC GCTGACCGGC AACGCCAACG TCGCGGGTCT CGCCAAGCTG
GCGAAGGAGT TCAACGCAAG ATTCGTCGCG GTGGCCGATC CGGCCCGGCT CGGCGAATTG
CGCGCCGCCC TCGCCGGAAC CGACATTGCC TATGGGGCCG GCGAGAGCGC GGTGATCGAG
GCCGCGGCGC GGCCGGCCGA CTGGGTGATG GCGGCGATCT CTGGCGCAGC CGGGCTCAAG
CCGGCGTTGG CCGCGGTCGA TCGCGGCGCC ACGGTGGCAC TGGCCAACAA GGAGTGCCTG
GTCTGCGCCG GGGACTTCTT CATGAGCCGG GCGGTCGCCG CGGGATCCTG CATCCTGCCG
GCCGATTCCG AACACAACGC GCTGTTCCAG GCGCTGGCCT CGGGCAACCG CCACGAACTG
ACCCGCGTCA TCATCACCGC CTCCGGTGGG CCGTTCCGGA CCTGGTCCGC CGCCGATATC
GAGCAGGCGA CGCTGGCGCA GGCGCTGAAG CACCCGAACT GGAGCATGGG CCAGAAGATC
ACCATCGACT CGGCCTCGAT GATGAACAAG GGCCTCGAGG TGATCGAGGC CTCGTATTTG
TTCGCGCTGT CGCCGGACGA GATCGACGTG CTGGTGCATC CGCAGTCGAT CGTTCACGGT
ATGGTCGAAT TCGCCGATCA TTCGGTGGTG GCGCAGCTCG GCGCCCCCGA CATGCGGATC
CCGATCGCGC ACTGCCTGGG CTGGCCGGAC CGGATCGTCG GCCGCGCCGC CCGGCTGGAT
CTCGCCAAGA TCGGCCAGTT GACCTTCGAG GCTCCGGATT TCGAACGATT TCCAGGCCTG
CGGCTGGCCT ATGACGCGCT GCGCGCCGGC AATGGCGCCA CGACCGTCTA CAATGCGGCG
AACGAGATCG CGGTCGCGGC CTTCATCGCC CAGAAGATCA GGTTCGGGGC GATCGCCCGG
CTGGTCGAGG ATACGCTGAA CGCGTGGATC CGGGCCGGCA ATCTCGCGCC GCTCGGCAGC
GCCGACGATG CCATCGCCGT TGACCATAAC GCGCGAAAAA TGGCTGCCAC CCTATTGCCT
CAAATTGCCG CAAAGGCATC CTAG
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| Protein sequence | MSAVPLKNTD AAHDGVRSIS VLGATGSIGD STMDLLRAAP EKYRVEALTG NANVAGLAKL
AKEFNARFVA VADPARLGEL RAALAGTDIA YGAGESAVIE AAARPADWVM AAISGAAGLK
PALAAVDRGA TVALANKECL VCAGDFFMSR AVAAGSCILP ADSEHNALFQ ALASGNRHEL
TRVIITASGG PFRTWSAADI EQATLAQALK HPNWSMGQKI TIDSASMMNK GLEVIEASYL
FALSPDEIDV LVHPQSIVHG MVEFADHSVV AQLGAPDMRI PIAHCLGWPD RIVGRAARLD
LAKIGQLTFE APDFERFPGL RLAYDALRAG NGATTVYNAA NEIAVAAFIA QKIRFGAIAR
LVEDTLNAWI RAGNLAPLGS ADDAIAVDHN ARKMAATLLP QIAAKAS
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