Gene RPB_2816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2816 
Symbol 
ID3910609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3209531 
End bp3210388 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content70% 
IMG OID637884716 
Producthypothetical protein 
Protein accessionYP_486429 
Protein GI86749933 
COG category[S] Function unknown 
COG ID[COG3494] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGTC CCGTCCCGCA GATCGACTCG CCTGTCGGTG TCATCGCCGG CGGAGGTGTG 
TTGCCGTTCG CGGTCGCGGA CGCGTTGCAG ACACGGACAA TCACGCCGCT GCTGATCGGC
CTGCGCGGCT TTTGCGATCC GAACGAGATC GCGCGATTTC GCCATCACTG GATCTCGATC
GGCCAGTTCG GCCGGTTGAA GCGGTTGCTG CGCACCGAGC ATTGCCGCGA CGTCGTGTTC
ATCGGCTCGC TGATCCGGCC GGCGCTGACG TCGGTTCGGC TCGACTGGGG CGCGTTCCGC
GTGCTGCCGC GCGTGATGGC CGCGTATCGC GGCGGCGACG ATCATTTGCT CACCAGCATC
GGCCGGATCT TCGAGGGCGA GGGCTTTCGC CTCCGCGGCG TCAAGGACGT CGCGCCGGAA
CTGCTGATGC CGCCAGGCGA ACTGACCAAG GCCGCCCCCG ATACTCGGCA TCGCGCCGAT
ATCGCCAAAG GACAGGCGGT GCTGGCGGCG CTGAGCCCGT TCGACATCGG CCAGGCCGTG
ATCGTGATCG AGGGCCATGT CGTGGCGGTC GAGGATATCG GCGGCACCGA CGCGCTGCTG
GCCAATCTGG CGCGGCTGCG CGGGCAGGGC AGGATCGCCG CCAAGCCCGG CCGCGGCGTC
CTGGTGAAGG CGCCCAAGAC CGGCCAGGAC CTGCGCTTCG ACCTGCCGAC GCTCGGCCCG
CGCACCATCG AGGGCGTCGC CGCCGCCGGC CTCGCGGGCG TCGCCGTGGC CGCCGGCAAT
ACGCTGGTGG CCGAACCGCA GGCGATGATC GCGGCCGCCG ACAAGGCGGG TCTGTTCGTC
ACCGGTGTGC CGGCGTGA
 
Protein sequence
MTGPVPQIDS PVGVIAGGGV LPFAVADALQ TRTITPLLIG LRGFCDPNEI ARFRHHWISI 
GQFGRLKRLL RTEHCRDVVF IGSLIRPALT SVRLDWGAFR VLPRVMAAYR GGDDHLLTSI
GRIFEGEGFR LRGVKDVAPE LLMPPGELTK AAPDTRHRAD IAKGQAVLAA LSPFDIGQAV
IVIEGHVVAV EDIGGTDALL ANLARLRGQG RIAAKPGRGV LVKAPKTGQD LRFDLPTLGP
RTIEGVAAAG LAGVAVAAGN TLVAEPQAMI AAADKAGLFV TGVPA