| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2795 |
|---|
| Symbol | |
|---|
| ID | 3910588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 3185514 |
|---|
| End bp | 3186299 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637884695 |
|---|
| Product | triosephosphate isomerase |
|---|
| Protein accession | YP_486408 |
|---|
| Protein GI | 86749912 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0149] Triosephosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGTGT CCATGCCGGT CCCCGCCGTT CGTTCGCTGA TTGCCGGAAA CTGGAAGATG
AACGGCCTCA AGGCCGCTTC GTCTGAACTC GATGCGATCC TGGAAGGCGC GGCGCAACTT
TCGTCGGGGG TCGATCTGCT GGTATGCCCG CCCGCGACGC TGATTGCGGC GTTCGCCGAT
CGGCTCGCGG CCCACGCCAA CAGCGCGCTG CCGGTCGCAA TTGGTGCACA GGATTGCCAC
ACCAATGCCG CAGGCGCACA TACCGGCGAC ATCTCGGCCG AAATGCTGGC GGATGCCGGC
GCCCGCACTA TTATCGTCGG CCATTCCGAG CGCCGCGCCG ACCACGCCGA GACCGACGCG
ATCGTCCGCA CCAAGGCGCA GGCGGTCTGG CGGGCAGGGT TGGTTGCGAT CGTCTGCGTT
GGCGAAACCC AAGGTGAGCG CAATGCCGGC CACACCCTCG ATGTGGTCGC CGGCCAGCTC
GCCGGCTCGC TGCCGGACGG CGCAACCGCC GCCAATCTGG TGGTGGCCTA TGAGCCGGTC
TGGGCGATCG GCACCGGCAT GACGCCGACT GCCGCAGATG TCGAGGAAGT TCATGGATTT
ATCCGCCAGA CTCTGACGCA ACGCTTCAAC GGCGAGGGCG AGCGCATGCG GTTGCTTTAC
GGCGGTTCGG TGAAGCCCTC CAACGCCAGC GAGCTGATGG CGGTTCCCCA CGTCAACGGC
GCGCTGGTCG GTGGCGCCAG CCTGAAGGCG TCGGACTTCC TTGCGATCGC GGCCGGGTGC
CCCTGA
|
|---|
| Protein sequence | MRVSMPVPAV RSLIAGNWKM NGLKAASSEL DAILEGAAQL SSGVDLLVCP PATLIAAFAD
RLAAHANSAL PVAIGAQDCH TNAAGAHTGD ISAEMLADAG ARTIIVGHSE RRADHAETDA
IVRTKAQAVW RAGLVAIVCV GETQGERNAG HTLDVVAGQL AGSLPDGATA ANLVVAYEPV
WAIGTGMTPT AADVEEVHGF IRQTLTQRFN GEGERMRLLY GGSVKPSNAS ELMAVPHVNG
ALVGGASLKA SDFLAIAAGC P
|
|---|
| |