| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2731 |
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| Symbol | secF |
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| ID | 3910524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3114443 |
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| End bp | 3115546 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637884631 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_486344 |
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| Protein GI | 86749848 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.447806 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.258523 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACATCGA CACAGTGGAT TTTGATCGGG CTGGGCGCGT TGGTCGTGGC GCTGACGATC
GTCAGCATCA TGGGCTGGCT GCCGTCGCTG CGGATCGTGC CCGACGACAC GCATTTCGAC
TTCACCCAAT TCCGGCGGAT CAGTTTTCCG ATCTCGGCGC TGCTGTCGAT CGCCGCGATC
ACGCTGTTCT TCACCCACGG GCTGAACTTC GGCATCGACT TCAAGGGCGG CACGCTGCTC
GAGGTCAGGG CTCATTCCGG CGCGGCCGAT ATCCCCGGGA TGCGCGACAC GCTGAGCAAA
CTCGGGCTCG GTGAAGTCCA GCTCCAGCAA TTCGGCGGTC CGTCCGAGGT GCTGATCCGC
GTTGCCGAAC AGCCCGGCGG CGACGCCGCG CAGCAGGAGG CGGTGCAGAA GGTGCGCGGC
GCGCTCGGCA ATTCGGTCGA CTATCGCCGC GTCGAAGTGG TCGGCCCGCG CGTCTCGAGC
GAACTCCTGG CCTACGGCAT GCTCGGCCTG ATGCTCGCGA TCCTGGGCAT TCTGGTCTAT
CTCTGGTTCC GGTTCGAATG GCAGTTCGCG CTCGGCGCGA TGATCGCCAA CGTCCACGAC
ATCGTGCTGA CGATCGGCTT CATGTCGATC AGCCAGGTCG ATTTCGACCT CACCAGCATC
GCGGCGCTGC TGACGATTCT CGGCTATTCG CTCAACGACA CCGTGGTGAT CTACGACCGC
ATCCGCGAGA TGCTGCGGCG CTACAAGAAG ATGCCGATGC CGCAGCTTCT GAACGAGTCG
ATCAACTCGA CGCTGTCGCG CTCGATCATC ACCCACGTCA CCGTGACGCT GGCGCTGTTC
GCGCTGCTGC TGTTCGGCGG CAACGCGATC CACTCCTTCA CGGCGGTGAT GATGTTCGGC
GTGGTGCTGG TCGGCACCTA CACCTCGATC TTCATCGCGG CGCCGATCCT GATCTATCTC
GGCGTCGGCA CGCATCGGCT CGACGATCCG TCGGAAAAAA CCGAACGGTC GGAAAAGGCC
GCGGCGCTGG CGACACCCGA GGGGGCCGCG ATTCCCCAGA CGGCCGAGAA GCCGAAGAAG
CCTGTGAAGT CGGGGAAGCG CTGA
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| Protein sequence | MTSTQWILIG LGALVVALTI VSIMGWLPSL RIVPDDTHFD FTQFRRISFP ISALLSIAAI
TLFFTHGLNF GIDFKGGTLL EVRAHSGAAD IPGMRDTLSK LGLGEVQLQQ FGGPSEVLIR
VAEQPGGDAA QQEAVQKVRG ALGNSVDYRR VEVVGPRVSS ELLAYGMLGL MLAILGILVY
LWFRFEWQFA LGAMIANVHD IVLTIGFMSI SQVDFDLTSI AALLTILGYS LNDTVVIYDR
IREMLRRYKK MPMPQLLNES INSTLSRSII THVTVTLALF ALLLFGGNAI HSFTAVMMFG
VVLVGTYTSI FIAAPILIYL GVGTHRLDDP SEKTERSEKA AALATPEGAA IPQTAEKPKK
PVKSGKR
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