| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2695 |
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| Symbol | |
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| ID | 3910488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 3079239 |
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| End bp | 3081374 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637884595 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_486308 |
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| Protein GI | 86749812 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.316002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGATC GGACAACCGC GAGCCGGCAC GCGCTCTCGA TGGCCGGCGG ATGGGCTGCG
GCGGTCGGAA TGGGCGGCGC GAGCGCGCTC ACGATTCTGT CGGTGGTCGC CGCGACGCCC
GCATTCGGAC AGACCGCCAC CGCCTCGCCC ACGGCCGAGC GCGCGATCTC GCTCGATGTC
ATCACGGTCA CCGGCGAGAA GATCGAGCGC GACCAGAAGA ACACGGCGTC GTCGGTTTCG
GTGATCACCG GCAAGGACAT CGAAAAGGAA AAGACCGGCG ACGCCACGGT CAGCGAAGTG
GTCGCCGGGG TGCCCAACGT GGTCTACACC GACACGGTCA GCGCACCGGT GATCCGCGGC
CAGGATACGC AGGGTCCCCT CACCGGCCAG TATTCGTTCT GGGGTGGCAC CGTTCCGCGC
GCGACCATCA ATCTCGACGG GCACTATCTC AACTACAGCG AGTACTATTT CGGCGCCACC
TCCGTCTGGG ACGTGAAGAG CGTCGAGGTC TTCCGCGGGC CGCAGACCAC GTCGCAGGGC
GCCAACGCCA TCGCCGGCGC CATCATCGTC AATACCAAGG ATCCGACCTT CAAGCCGGAA
GGCGCCTATC AGGCGGAGAT CGGCAGCTAC AACACGCGGC GTACTTCGGT GATGGTGTCG
GGGCCGTTGG TGGAAAACCA GTTGGCTGCG CGCCTCGCCA TCGACTACTC CGCCCGTGAC
ACCTTCATCG ACTACGTCAG TCCGAATTTC CAGAAGGGGC AAACGGACCA GGACTTCCGG
GCGCTCAACG CGCGGTTCAA GCTGCTGTGG CTGCCGACGG AGATCTCCGG CCTGGAGGCG
AAGCTCACTT ACGCGCACAA TGCCAGCAAC CGGCCGGGCC AGGAAGCGGC GTCCGCGCCC
TACGAGAACC TGCAGCACGT CACGACGACG ATGCCGACCT GGAATCAGAC CACCGACACC
GGAATCTTCG ATCTCAAATA CGACTTCTAC AACGGCTTCA AGCTGTTCAA TCAGACGCAA
TACACCAACT CGTCGGTTCA CCGCGTTGCT CCCGTCGCCT CGAACGGCAA TGCCGACATC
GAACAGCGCA ATGTTTCGAA CGAGACGCGC GTCACCTTCG GCGACCAGAG CACCGTCCTC
AGCGGACTTG CCGGCGTCTA TTACGGCTAC ACCAAGACCG ACGAAGTGCT TTATCTCAGC
GGGCTTTCCA CCTTCGACGA TCGCAAGAGC AATCTCGGCG TGTTCGGTGA ACTGACCTAC
AAGCTGACGG ATCGCTGGAC GTTGAACGGC GGCTTGCGCA CCCAGCACGA TCATATCCAG
CGTCTCGGCG TTTCGGTCTA CGCCCCCGGC CCTGTCGACT ACGACAACAC CTTCACGGTA
TTGTTGCCGA AAATGTCGCT CGCTTATGCG CTGACGCCGG GCTGGACCGT CGGCGCGCTG
GTCAGCCGCG GCTACAATCC CGGCGGCGTC TCGCTCAACC TCAACTCCCG GCAATGGATG
TCGTTCGAGG ACGAGTCGCT GTGGAACTAC GAGCTGTTCA CGCGCGCGAA CCTGCTGAAC
GACACGCTCA CGTTGAACAG CAACGTGTTC TACATGGATT TCAAGAACGC CCAGTACAAC
ATCCCGGTCG TCATCTCGAC CGGGGTCGCG CAGACCTACG TCATCAACGC GGAGAAGGCG
CACGCCTACG GCCTGGAGGT CGGCATCGAC TATCGGGTGC TGCAAGGCCT GACGCTCAAG
GCGGGAGCCG GCGTGCTGCA GACCAAGATC GACCAGATCT CCAGCAACGT CAGCTACGAG
GGCAATGAAT TCGCGAAATC GCCTGGCTAC ATGCTCAGTT TCGGCGCCAG CTGGGACGCG
ACCGACAAGC TCAACGTGTC CGGCGAGGTG CGCCATCTCG ACAGATACTA TTCCGACGTC
GCGAACACCG TAAAATACTC GATTGATCCC TATACCATCG CCGATGTGCG CGTCAGCTAT
CAGTTTCACC AGCTCGCGCA GGTCTACGGC TACGTCAAGA ACGTCTTCGA CGAGCGCGCT
CCGACCTATA TGCAGGAGAA CCGCGGCATC GGCGGCACCG AGGCCAGCAT GACTGCGCCC
CGAATGTTCG GCATCGGCCT GCGGGGGACG TTTTGA
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| Protein sequence | MQDRTTASRH ALSMAGGWAA AVGMGGASAL TILSVVAATP AFGQTATASP TAERAISLDV
ITVTGEKIER DQKNTASSVS VITGKDIEKE KTGDATVSEV VAGVPNVVYT DTVSAPVIRG
QDTQGPLTGQ YSFWGGTVPR ATINLDGHYL NYSEYYFGAT SVWDVKSVEV FRGPQTTSQG
ANAIAGAIIV NTKDPTFKPE GAYQAEIGSY NTRRTSVMVS GPLVENQLAA RLAIDYSARD
TFIDYVSPNF QKGQTDQDFR ALNARFKLLW LPTEISGLEA KLTYAHNASN RPGQEAASAP
YENLQHVTTT MPTWNQTTDT GIFDLKYDFY NGFKLFNQTQ YTNSSVHRVA PVASNGNADI
EQRNVSNETR VTFGDQSTVL SGLAGVYYGY TKTDEVLYLS GLSTFDDRKS NLGVFGELTY
KLTDRWTLNG GLRTQHDHIQ RLGVSVYAPG PVDYDNTFTV LLPKMSLAYA LTPGWTVGAL
VSRGYNPGGV SLNLNSRQWM SFEDESLWNY ELFTRANLLN DTLTLNSNVF YMDFKNAQYN
IPVVISTGVA QTYVINAEKA HAYGLEVGID YRVLQGLTLK AGAGVLQTKI DQISSNVSYE
GNEFAKSPGY MLSFGASWDA TDKLNVSGEV RHLDRYYSDV ANTVKYSIDP YTIADVRVSY
QFHQLAQVYG YVKNVFDERA PTYMQENRGI GGTEASMTAP RMFGIGLRGT F
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