| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2650 |
|---|
| Symbol | |
|---|
| ID | 3910442 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 3029254 |
|---|
| End bp | 3030231 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637884549 |
|---|
| Product | 3-oxoacyl-(acyl carrier protein) synthase III |
|---|
| Protein accession | YP_486263 |
|---|
| Protein GI | 86749767 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
|---|
| TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.186094 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0674552 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGGTGG TTCGTTCGGT CGTGCTGGGC TGCGGCGCTT ATCTGCCGGA GCGGATTCTC
ACCAACGCCG AACTGGCCGC GACCGTCGAC ACCTCGGACG AGTGGATCGT GCAGCGCACC
GGCATCCGGG AGCGCCACAT CGCCGCCGAG GGCGAGTACA CCTCGCATCT CGCCACCAAA
GCGGCGCAGG CCGCGCTCGA CGACGCCGGG CTCACGGCGG ATCAGATCGA TCTAATCGTG
CTGGCGACAT CGACACCGGA CCACACCTTT CCGGCGACCG CGGTGCAGGT CCAGGCCGCG
CTCGGCATGA CCCACGGCGT CGCCTTCGAT CTGCAGGCGG TGTGCTCCGG CTTCGTCTTC
GCGGTCGCCA CCGCCGACAA CTTCCTGCGC GGTGGATCGG CCAAGCGTGC GCTGGTGATC
GGCGCCGAAA CCTTCTCGCG CATCCTCGAC TGGAACGACC GCGGCACCTG CGTGCTGTTC
GGCGACGGCG CCGGCGCGAT CGTGCTGGAA GCGCAGGAAG GCTGGGGCAC CTCGGCCGAC
CGCGGCGTGC TGACGACGCA TCTGCGCTCC GACGGCCGCC ACAAGCACAA ATTGTATGTC
GACGGCGGGC CGAGCTCGAC GCAGACCGTC GGCCATCTCC GCATGGAAGG CCGCGAAGTG
TTCAAGCACG CGGTCGGGAT GATCACCGGG GTGATCATCG ATGCATTCAA CGCCAGCGGC
ACCAGCGCCG ACAATGTCGA CTGGTTCGTG CCGCATCAAG CCAACAAGCG CATCATCGAC
GCTTCGGCGC AAAAACTCCA TATTGCGCCG CAGAAGGTGG TGATGACCGT GGACCGCCAC
GGCAACACAT CGGCCGCCTC GATTCCGCTG GCGCTGGCCG CGGCGGTGGC CGACGGTCGC
ATCCAGAAGG GCCATCTGGT GCTGCTGGAA GCCATGGGCG GCGGCTTCAC CTGGGGCTCG
GCACTGCTGC GCTGGTAG
|
|---|
| Protein sequence | MTVVRSVVLG CGAYLPERIL TNAELAATVD TSDEWIVQRT GIRERHIAAE GEYTSHLATK
AAQAALDDAG LTADQIDLIV LATSTPDHTF PATAVQVQAA LGMTHGVAFD LQAVCSGFVF
AVATADNFLR GGSAKRALVI GAETFSRILD WNDRGTCVLF GDGAGAIVLE AQEGWGTSAD
RGVLTTHLRS DGRHKHKLYV DGGPSSTQTV GHLRMEGREV FKHAVGMITG VIIDAFNASG
TSADNVDWFV PHQANKRIID ASAQKLHIAP QKVVMTVDRH GNTSAASIPL ALAAAVADGR
IQKGHLVLLE AMGGGFTWGS ALLRW
|
|---|
| |