| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2643 |
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| Symbol | |
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| ID | 3910435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 3023883 |
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| End bp | 3024566 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637884542 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_486256 |
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| Protein GI | 86749760 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.735097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.197279 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGCAT TTTTCTTCGA CCTCGATGGC ACGCTGACCG ACTCGCGGAC GGGGCTGCAC
GATTCGTTTC GCGCGGCGAT CGAAGCGATC GGCGTGATGC CGCTTGGCGA CGCCGAGCTT
GACCTGTTCC TAGGCACGCC TCTGCCGGAG ATGTTCCGAA CGTTGAAGGC CGACATCAGC
CAGGCCGGAA TCGAGGCCGG CATCGACGCT TTCCGGGCTT ACTACGAAAC CCACGGTATC
CGTCAAAACC GTGCCTATCC CGGAGTTCGG GAGATGCTGG AGGCTTTGAA GACCAGACGG
ATTCCTGTCT GGGTCGTGAC CTCCAAGCCC CAGGCCTATG CCGAGCGTGT GATCCGCGAT
CTAGGCTTTG CCGATTTGGT CACCGACGTC GTCGGCGCGG GGCTCGCGGA GTTGGACACT
AAAAGCGATC TGGTGAAGCG CGCGCTCGGC GAAGCGGGCG TCGCCCCTGG CGATGCCGTG
ATGGTCGGAG ACCGGCGCTA TGATGTCGAA GGGGCCAAGG CCAATGGTGT CGTCGCTGTC
GGCGTGACTT GGGGCTACGG CACGCGCGAA GAACTCGAGT CCGCGGGCTG CGATCGCCTC
GTCGAGTCCG TTTCGGAGTT CTGTCAGATC TTCATCGATC GCTCGATCGT GCTTCGTACC
AGGACCGCCG CCGCGGCCTG CTGA
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| Protein sequence | MKAFFFDLDG TLTDSRTGLH DSFRAAIEAI GVMPLGDAEL DLFLGTPLPE MFRTLKADIS
QAGIEAGIDA FRAYYETHGI RQNRAYPGVR EMLEALKTRR IPVWVVTSKP QAYAERVIRD
LGFADLVTDV VGAGLAELDT KSDLVKRALG EAGVAPGDAV MVGDRRYDVE GAKANGVVAV
GVTWGYGTRE ELESAGCDRL VESVSEFCQI FIDRSIVLRT RTAAAAC
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