Gene RPB_2581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2581 
Symbol 
ID3910373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2962729 
End bp2963754 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content63% 
IMG OID637884481 
ProductNADH dehydrogenase subunit H 
Protein accessionYP_486195 
Protein GI86749699 
COG category[C] Energy production and conversion 
COG ID[COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.393278 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.135958 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATT TCTTCATGAC CAACCTGTGG CCGCTGATCG TCGTGATCGG GCAGAGCGTG 
CTGCTGATCG TGGTGCTGCT GATCTCGATC GCCTACATCC TGCTTGCCGA CCGCAAGATC
TGGGCGGCGG TGCAGATCCG GCGTGGCCCG AACGTGGTCG GGCCGTGGGG CCTGCTGCAA
TCCTTCGCCG ATTTGCTGAA GATGATCCTG AAGGAGCCGA TGATCCCGTC CGGCGCCAAC
AAGGGCGTGT TCCTGCTGGC GCCTTTGGTG ACCTGCGTGC TGGCGCTGTC GGCCTGGGCG
GTGATCCCGG TCAGCGCCGG CTGGGTGATC GCCGATATCA ATGTCGGCGT GCTGTACATC
CTGGCGGTGT CGTCGCTGTC GGTCTACGGC ATCATCATGG CCGGCTGGTC GTCGAACTCG
AAATATCCGT TCCTGGCCGC GCTGCGCTCG GCGGCGCAGA TGGTGTCCTA CGAGGTCTCG
ATCGGTTTCG TGATTATCTG CGTGCTGCTG TGCGTCGGTT CACTCAACCT GACGGCGATC
GTCCAGGCGC AGAACTCGCA ATGGGGCGTC CTCGGCTGGT ACTGGCTGCC GCTGTTTCCG
ATGTTCGTGG TGTTCTACGT CTCGGCGCTG GCCGAGACCA ACCGGCCGCC GTTCGATCTG
GTCGAAGCCG AATCCGAACT GGTCGCCGGG TTCATGGTCG AGTACTCGTC GACGCCCTAC
ATGCTGTTCG TGCTCGGCGA ATACGTCGCG ATCGTCACGA TGTGCGCGAT GGGCACGATC
CTGTTTCTCG GCGGCTGGCT GCCGCCGGTG CCCTACGCCC CGTTCACATG GGTGCCGGGG
ATCGTCTGGT TCGCGCTCAA AGTCCTGTTC ATGTTCTTCA TGTTCGCGAT GGCGAAGGCG
ATCGTGCCGC GCTACCGCTA CGACCAACTG ATGCGGCTCG GCTGGAAGGT GTTCCTGCCG
CTGTCGCTGG CGATGGTGGT GATCGTCGCC GCCGTCCTGC AATTCGCGGG GCTCGCGCCG
AAATGA
 
Protein sequence
MADFFMTNLW PLIVVIGQSV LLIVVLLISI AYILLADRKI WAAVQIRRGP NVVGPWGLLQ 
SFADLLKMIL KEPMIPSGAN KGVFLLAPLV TCVLALSAWA VIPVSAGWVI ADINVGVLYI
LAVSSLSVYG IIMAGWSSNS KYPFLAALRS AAQMVSYEVS IGFVIICVLL CVGSLNLTAI
VQAQNSQWGV LGWYWLPLFP MFVVFYVSAL AETNRPPFDL VEAESELVAG FMVEYSSTPY
MLFVLGEYVA IVTMCAMGTI LFLGGWLPPV PYAPFTWVPG IVWFALKVLF MFFMFAMAKA
IVPRYRYDQL MRLGWKVFLP LSLAMVVIVA AVLQFAGLAP K