| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2513 |
|---|
| Symbol | |
|---|
| ID | 3910302 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 2874302 |
|---|
| End bp | 2874955 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637884412 |
|---|
| Product | abortive infection protein |
|---|
| Protein accession | YP_486129 |
|---|
| Protein GI | 86749633 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0557527 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.348066 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGATT TGCGACATAC CAGACAGGCG TGCCCGACAC CGATCGAGAT GACCGCCCGC
GCGCAGCGCT GGCGGCTGGC GCCGCTCGCC GGTCTCGCTT TGCTGCTCAC GGCGCCCGGC
ATCGCCATCC AGCTCGACCT GCTTCCGTTC TCCTACCGGA TCCACGCGTT GCTGCTGGTC
TCCGGCCTGT GCATCGGCCT GTGCCTGTGG GCCGGCGTGT CGTTCACGGA ACTCGGCTTC
GGCAGGCCGC ATCAATGGAG CCATTGGCTC GGCTGCGCGG CCGTCACGCT CGCGATCGCC
GCGGTGATGC TGCTTCAGAC GCAGTTCTTC ACCTTCGAGG CCAAGCCGCC GGCCTGGCTG
AGCTTCGCGC CGTTCTACGT GCTGGTGTCG AGTCCATGCC AGGAAGTGGT GTGCCGCTCG
ATCCCGAAAC TGATCACCGA CAAGCTGTCG CGCGGCGGCT GGGCCTATGT GATGTATTCG
GCGGCAATGT TCTCGCTGAT CCATCTCTGC TACGGCGACC CGGCGCTGCT GCTCAACACC
TTCCTGCTCG GCATTGTGTG GGCGGCCGCG TACCTGTGGA TGCGCAACAT CTGGCCGCTG
ATCGTCTCGC ATGCCGCGAT CGGCACGCTG GCCTTCGCGC TCGGACTGGC CTGA
|
|---|
| Protein sequence | MTDLRHTRQA CPTPIEMTAR AQRWRLAPLA GLALLLTAPG IAIQLDLLPF SYRIHALLLV
SGLCIGLCLW AGVSFTELGF GRPHQWSHWL GCAAVTLAIA AVMLLQTQFF TFEAKPPAWL
SFAPFYVLVS SPCQEVVCRS IPKLITDKLS RGGWAYVMYS AAMFSLIHLC YGDPALLLNT
FLLGIVWAAA YLWMRNIWPL IVSHAAIGTL AFALGLA
|
|---|
| |