Gene RPB_2512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2512 
Symbol 
ID3910301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2872384 
End bp2874246 
Gene Length1863 bp 
Protein Length620 aa 
Translation table11 
GC content66% 
IMG OID637884411 
ProductK+ potassium transporter 
Protein accessionYP_486128 
Protein GI86749632 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3158] K+ transporter 
TIGRFAM ID[TIGR00794] potassium uptake protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.201429 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.268531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGC ACAAGAACAG CGTCGGGCTG CTGGTCAGCG CGGTCGGCGT CGTCTTCGGC 
GACATCGGCA CCAGCCCGCT CTACGCCATG AAGGAGACTT TCGCCGGTCA TCACCCGATC
ATGGTGTCGC CGGAGAACAT CTTCGGCGTG TTGTCGCTGG TGTTCTGGAC GGTGATGCTG
CTGGTCACGG TGAAATACGT GATCCTGATC ATGCGTGCCG ACAACCACGG CGAAGGCGGC
AGCCTCGCGC TGCTGGCGCT GGTGACCGAG CTGACGCGCG GGCGGCGCGT GCACTATCCG
TTGATGCTGC TCGGCGTGAT CGCCGCGGCG CTGTTTTACG GCGACAGTAT GATCACGCCG
GCGATCTCGG TGCTCAGCGC GGTCGAGGGG CTCGAAGTCG TGACGCCCGA CCTGAAGGCG
TATGTCGTGC CGATCACCGC GCTGGTGCTG ACCGGCCTGT TCGCGATCCA GTCGCGCGGA
ACCGCGCTGG TCGGTCGCCT GTTCGGGCCG GTGATGTGCC TGTGGTTCGT CACGCTGGCG
CTGCTCGGCA TCGCCAACAT CGTCCGTGCG CCGGAAGTGC TGGAGGCGAT CAGTCCGACC
TTCGCGATCG AATTCGTCAT CCGTCATCCG CTGATGAGTT TCTACGCGCT CGGCACCGTC
GTGCTGGCCG TCACCGGCGG TGAAGCGCTG TACACCGACA TGGGCCATTT CGGCCGGTTT
CCGATCCGGC TGGGGTGGTT CAGCCTGGTG CTGCCGGCGC TGCTGCTGAA CTATTTCGGC
CAGGGCGCGC TGCTGATCGC CGACCCCGCC GCGATCCAGA ATCCGTTCTT CCGGATGGGG
CCGGAATGGA TGGTGATGCC GATGGTCGCG CTGGCGACGC TGGCCACCGT GATCGCGTCG
CAGGCGGTGA TCTCCGGCGC GTTCTCGGTG GCGCGGCAGG CGATCCAGCT CGGCCTGCTG
CCGCGGATGA CGATCGTGCA CACCTCGGGC GAGGAGGCTG GCCAGATCTA CGTGCCGTTC
ACCAACTGGA CCTTGTACTT CGCCGTGATG GCGCTGGTGA TCGGCTTCCA GTCGTCGAGC
AATCTGGCGG CCGCCTACGG CATCGCCGTC ACCGGCACGA TGATGATCGA CACCATCCTG
GTGTCGTTCG TGATGGCGCT GCTGTGGCGC TGGAACATGG CGCTGGTGAT CGTGGTGGCG
GGCACGCTGC TGCTGGTCGA TTTCGCGTAT TTCGCCGCCA ACATCATCAA GGTGGCGCAG
GGCGGCTGGT TCCCGCTGTT CATCGGCTTC ATCTCGTTCA CGGTGCTGAC GACGTGGCGG
CGCGGGCGCG CGCTGGTGCG CAAGCAGCTC AAGAAGCAGG CGGTGCCGCT CGACGTGGTG
CTGCGCGCGC TCGGGCCCAA CGTGTCGCGG GCACGCGGCA CCGCGGTGTT CCTGACCGCC
GCGACCGACG GCGTGCCGCC GGCGCTGCTG CACAATCTCA AGCACAACCA GACCGTCCAC
CAGCGCGTCG TGCTGGCGAC CGTGACCACC GCGGAGACGC CCTATGTGCC CGACAGCGAG
CGCGTGCACA TGACCGATAT CGGCGACGGC TTCCATCGCC TGATCATCCG CTACGGTTTC
ATGCAGACCC CCGACATTCC GGCGGCGCTG ACGCTGTGCA AGCAGTTCGG CCACGAGTTC
AACATGATGT CGACCTCGTT CTTTCTCAGC CGCGAGACCT TCGTGCCGAG CCTCAATCCC
GGCATGGCGC TGTGGCGCGA GCGGCTGTTC ACCTTCATGA CGCTGAACGC GACGCGGGCC
ACGACCTTCT TCAAGATCCC GACCGACCGC GTCGTCGAAC TCGGAACCCA GCTCGAGATC
TGA
 
Protein sequence
MSQHKNSVGL LVSAVGVVFG DIGTSPLYAM KETFAGHHPI MVSPENIFGV LSLVFWTVML 
LVTVKYVILI MRADNHGEGG SLALLALVTE LTRGRRVHYP LMLLGVIAAA LFYGDSMITP
AISVLSAVEG LEVVTPDLKA YVVPITALVL TGLFAIQSRG TALVGRLFGP VMCLWFVTLA
LLGIANIVRA PEVLEAISPT FAIEFVIRHP LMSFYALGTV VLAVTGGEAL YTDMGHFGRF
PIRLGWFSLV LPALLLNYFG QGALLIADPA AIQNPFFRMG PEWMVMPMVA LATLATVIAS
QAVISGAFSV ARQAIQLGLL PRMTIVHTSG EEAGQIYVPF TNWTLYFAVM ALVIGFQSSS
NLAAAYGIAV TGTMMIDTIL VSFVMALLWR WNMALVIVVA GTLLLVDFAY FAANIIKVAQ
GGWFPLFIGF ISFTVLTTWR RGRALVRKQL KKQAVPLDVV LRALGPNVSR ARGTAVFLTA
ATDGVPPALL HNLKHNQTVH QRVVLATVTT AETPYVPDSE RVHMTDIGDG FHRLIIRYGF
MQTPDIPAAL TLCKQFGHEF NMMSTSFFLS RETFVPSLNP GMALWRERLF TFMTLNATRA
TTFFKIPTDR VVELGTQLEI