Gene RPB_2486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2486 
Symbol 
ID3910275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2844824 
End bp2845624 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content63% 
IMG OID637884385 
Productcyclic nucleotide-binding domain-containing protein 
Protein accessionYP_486102 
Protein GI86749606 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.215074 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCAGCG ACATCAACAA CAACCATTGC CCTTCGACGG TGAAGAACCG CGTTCTTGCG 
CAGCTGTCAC CCGAGGATTT TCAGGCCCTC AAGCCGATGC TGCGGCCGGT CGAATTCAAG
GGACGCGCTG TGCTGCAGGA GGCCAACCGG CCGGTCGAGT GCATTCACTT CATTGAAGAC
GGTCTCGTTT CGCACGTTTC CGGAAGCCGC ACCGACTACG TCGAGACCGC AATGGTCGGC
GTGTTCGGAT ATGTCGGAGT TCCCTTGGTC CTCGGAGCGT CGGTTGCGTC ACAGCGCTCG
ATCGTATCCA TGCCGGGAAC CGCGCTGCGG ATCGAGGCCG AGGATCTCGC GCGCGTGATC
GCCAGCCGGC CGCAGATCCG CGAGCAGTTG TTGCGCTACG TCCCCGCGCT GATCGCTCAG
AACACTCAGA GCGTGCTGTG CGCCGCCCGC CACGAGATCA ATCAGCGTCT GGCGCGATGG
CTGCTGCTGG CCAACGATCG CATCCAGAGT GACGTGCTGT ACATCACTCA TGAATTGTTG
GCCGCCAGCC TCGGCGTCCG CCGCGCAAGT ATCACCAATG CGCTGCTGCA GTTCGAGACC
GAAGGCATCG TGCAGAAGAC CCGCGGTGCG GTGCGCGTGA TCGATCGGCC AGGGCTCGAA
AACCGCGCCT GCGATTGCTA CCACATCGTG CGTGACGCCT ATGCGTGGAC GCAGATCACG
CATGACGGCC ACGATCACGC CAAGGGTTCC GACGCGTGCT CCCATGGGCA CGACGGCGGC
GTCATCGCGG GCACGGCTTG A
 
Protein sequence
MSSDINNNHC PSTVKNRVLA QLSPEDFQAL KPMLRPVEFK GRAVLQEANR PVECIHFIED 
GLVSHVSGSR TDYVETAMVG VFGYVGVPLV LGASVASQRS IVSMPGTALR IEAEDLARVI
ASRPQIREQL LRYVPALIAQ NTQSVLCAAR HEINQRLARW LLLANDRIQS DVLYITHELL
AASLGVRRAS ITNALLQFET EGIVQKTRGA VRVIDRPGLE NRACDCYHIV RDAYAWTQIT
HDGHDHAKGS DACSHGHDGG VIAGTA