| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2484 |
|---|
| Symbol | |
|---|
| ID | 3910273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 2842198 |
|---|
| End bp | 2844075 |
|---|
| Gene Length | 1878 bp |
|---|
| Protein Length | 625 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637884383 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_486100 |
|---|
| Protein GI | 86749604 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.814906 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCACTT TGTCCGACAT ATCGGTCCGG ATCGCGGGAC GGCTGCTGAT CGACCAGAGC
ACGGTGCAGA TCGCGCCGGG TGCCCGGGTC GGCTTCATCG GCCGCAACGG CGCCGGCAAG
TCGACGCTGT TTCACGCCAT CCGCGGCGAG CTCGCGACCG AGACCGGGCG CATCACCATG
CCGCCGCGCT GGCGCGTCGG CAGCCTCGCG CAGGAAGCGC CCAACGGGCC CGAGACCCTG
CTCGAAGTGG TGCTCAAGGC GGATTTGGAG CGCGACGCCC TGCTCGCGGA GGCGGAGACC
GCGCACGATC CGCATCGCAT CGCCGACATC CAGACCCGGC TGGTCGACAT CGACGCGCAT
TCGGCCCCGG CGCGCGCCGC CGCCATTCTC AGCGGCCTCG GCTTTTCCGC GGCGGACCAG
GCGCGCTCCT GTTCGGAATT CTCCGGCGGC TGGCGGATGC GGGTGGCGCT TGCGGCGACG
CTGTTCGCAG CGCCCGATCT GCTGCTGCTC GACGAGCCGA CCAACTATCT CGATCTCGAA
GGCACGCTGT GGCTCGAGGA TCACCTCGCC AACTATCCGC GCACGGTGAT CGTGATCAGC
CACGACCGCG ATTTGCTCGA CACCTCGGTG AACGAGATCT TGCATCTCGA TCGCGGCCGG
CTGGTGCATT TCCGCGGCAC CTACTCGGCC TATGCGGAAT TCCGTGCCAA CAAGGAGGCG
CTCGACGCCA AGAACGCCAA GCGGGAAGAA GCCCGGCGCA AGCACCTGCA GGAATTCGTC
GACCGCTTCA AGGCCAAGGC CTCGAAAGCG CGTCAGGCGC AGTCGCGCGT CAAGATGCTG
GAGAAGATGA AGCCGGTGAC GCGGCTGGTG AGCGACGACG TGCCCGACAT CGTCTTTCCC
GCGCCGGAGA AGACGCTGTC GCCGCCGATC ATCGCCGCCG ACAACGTCTC GATCGGCTAC
GACCCCAAAC ACCCGGTGCT GCGTCATGTC ACGCTGCGCG TCGACACCGA AGACCGCATT
GCTTTGCTCG GCGCCAACGG CAACGGCAAG TCGACGCTGG TGAAGCTGCT GGCCGATCGG
CTGACGCCGT TCTCAGGGAC GGTGACGCGA GCCGACAAGC TGTCGGTCGC TTACTTCGCC
CAGCACCAGC TCGACGAGCT CAACGAGGAT GGCTCGCCCT ACGACCACAT CCGCAAGCTA
ATGCCGGACG CGCCCGAGAG CAAGATCCGC GCCCGCGCCG GCCAGATCGG GTTTTCCGGC
AAGGCCGCCG ACACCCTGGT GAAGAGTCTG TCGGGCGGCG AAAAAGCGCG GTTGCTGTTG
GGCCTCGCGA CCTTCTACGG CCCGAACATG ATCATTCTCG ACGAGCCGAC CAACCATCTC
GACATCGACA GCCGCGCGGC GCTGGCGGAG GCGATCAACG ACTTTCCGGG CGCGGTCATC
ATGGTGTCGC ACGATCGCTA CCTGATCGAC GCCTGCGCCG ATCAATTGTG GGTGGTCGCC
GATCACAAGG TGAAGCCCTA TGACGGCGAT CTCGACGACT ACCGCCGCGC CGTGTTGTCG
TCACGCGGCG CCCGCAGCGG TTCGCGCGAG CCCAGGGAGC GAGCCGCGGA CGGAACCGGC
GCCAAGCAAC CACGTCAGAA GTCGGAGAAG CGCGTACCGC TGAAGCAGCA GATCGCCGAC
GCAGAAGTCG AGATCGAGCG GATCACCGCG ATCATCGCCA AGATCGATGC AGCGCTTGCA
TTGCCGGACC TGTTCACGCG CGATCCGAAA CAGGCCGCAC AGCTCTCCGG CGCGCGCGCG
AAAGCCGAAG CTGCGCTGCA GAAGGCCGAG GAACAATGGC TGGACGCGAG CTCGGCCTAC
GACAAGGCGC AAGGCTGA
|
|---|
| Protein sequence | MLTLSDISVR IAGRLLIDQS TVQIAPGARV GFIGRNGAGK STLFHAIRGE LATETGRITM
PPRWRVGSLA QEAPNGPETL LEVVLKADLE RDALLAEAET AHDPHRIADI QTRLVDIDAH
SAPARAAAIL SGLGFSAADQ ARSCSEFSGG WRMRVALAAT LFAAPDLLLL DEPTNYLDLE
GTLWLEDHLA NYPRTVIVIS HDRDLLDTSV NEILHLDRGR LVHFRGTYSA YAEFRANKEA
LDAKNAKREE ARRKHLQEFV DRFKAKASKA RQAQSRVKML EKMKPVTRLV SDDVPDIVFP
APEKTLSPPI IAADNVSIGY DPKHPVLRHV TLRVDTEDRI ALLGANGNGK STLVKLLADR
LTPFSGTVTR ADKLSVAYFA QHQLDELNED GSPYDHIRKL MPDAPESKIR ARAGQIGFSG
KAADTLVKSL SGGEKARLLL GLATFYGPNM IILDEPTNHL DIDSRAALAE AINDFPGAVI
MVSHDRYLID ACADQLWVVA DHKVKPYDGD LDDYRRAVLS SRGARSGSRE PRERAADGTG
AKQPRQKSEK RVPLKQQIAD AEVEIERITA IIAKIDAALA LPDLFTRDPK QAAQLSGARA
KAEAALQKAE EQWLDASSAY DKAQG
|
|---|
| |