| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2379 |
|---|
| Symbol | |
|---|
| ID | 3909379 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 2732840 |
|---|
| End bp | 2734261 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637884278 |
|---|
| Product | magnesium transporter |
|---|
| Protein accession | YP_485995 |
|---|
| Protein GI | 86749499 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2239] Mg/Co/Ni transporter MgtE (contains CBS domain) |
|---|
| TIGRFAM ID | [TIGR00400] Mg2+ transporter (mgtE) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.573917 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.465291 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACG AACTCGATGC GGTCGTGCGA GCCGACCAGA CCATGCCCGA TCATCTCTCG
ATGCGGGACG AGGACGGCGA AATCAGGGCC GACTTCGTCG CGGCGATCTC CCGCGCCATC
GCCGAGGAGA ATGCGCCGTT CCTGCGCGAA ATCGTCTCCG ACCTGCACGA GGCCGACGTC
GGCGACCTGA TCGAGGCGCT GGATTCCGAC GAGCGCGTCC GGCTGGTGGA ACTGACCGGC
GCCGATTTCC ACTTCTCGGC GCTGAACGAG GTCGACGAGA CCGTCCGCGA GGAGATCCTC
GAGGAACTCG AGCCCGAGGC CGTCGCCGAA GGCGTCCGCG AGCTCGATTC CGACGACGCG
GTCGAACTGC TGCAGGTGCT CGACGAGGAC GAGCAGGACG AGATCCTCGG CAAGCTGCCG
CAATCCGAGC GCGACGCGCT CGAGCGCAGC CTCGACTATC CGGAAAACTC CGCCGGCCGG
CGGATGCAGA CCGAATTCAT CGTGGTGCCG CGCGACTGGA ACGTCGGGCA GGCGATCGAC
TTCATGCGCG AGACCCCGGA TCTGCCGGAC CGGTTCTACG AGATCTACGT CGTCGACGGG
ATCAACCGCT GGCAGGGCGC GATCGCGCTC GACGCGCTGC TGCGCTCGCA TCGCGACGTG
CCGCTGGCCG ATCTGATCGA CGAGGACCGC CGCAAGGTCT CGGTGCTCGA CGACCAGGAA
GAGGTGGCGC GGCTGTTCGG CAAGTACAAT CTGGTCGCGG CGCCGGTGGT CGACACCGAC
GACCGCCTGG TCGGCGTGAT CACCATCGAC GACGTCGTCG ACGTCATCGA GGAAGAGGCC
GACGAGGACC TCAAGGCGCT GGGCGGCGTC TCCAGCGGCG AGGAACTGTC CGACCGGGTC
TGGACCATCG CCCGCAGCCG CTTCAACTGG CTGCTGGTCA ATCTCGCCAC CGCATTCCTG
GCCTCCTCGG TGCTCGGCCT GTTCGAAGGC GCGCTGGAGC AGATGGTGGC GCTGGCGGTG
CTGGCGCCGA TCGTCGCCAG CCAGGGCGGC AATGCCGCGA CCCAGACCAT GACGGTGGCG
GTGCGGGCGC TGGCGACCCG CGAACTCGGC TCCAGCAACG CCTATCGGGT GGTGATGCGC
GAACTGCTGG TCGGTCTGGT CAACGGCATC GGCTTTGCGA TCATCACCGG GCTGGCCGCC
TATGCCTGGT TCCGGGTGCC AGGGCTGGGC GTGGTGATCG GATTGGCGAT GGTGACCAAT
CTGGTGGCGG GCGCGCTCGG CGGAATCCTG ATCCCGATCG CGCTGGATCG CTTCCGGGTC
GATCCCGCCG TCGCATCGGG GACGTTCGTC ACCACGGTGA CCGATGTCGT CGGCTTCTTC
GCCTTCCTCG GCATCGCCAC GTTGTGGTTC GGGCTGAAGT AA
|
|---|
| Protein sequence | MADELDAVVR ADQTMPDHLS MRDEDGEIRA DFVAAISRAI AEENAPFLRE IVSDLHEADV
GDLIEALDSD ERVRLVELTG ADFHFSALNE VDETVREEIL EELEPEAVAE GVRELDSDDA
VELLQVLDED EQDEILGKLP QSERDALERS LDYPENSAGR RMQTEFIVVP RDWNVGQAID
FMRETPDLPD RFYEIYVVDG INRWQGAIAL DALLRSHRDV PLADLIDEDR RKVSVLDDQE
EVARLFGKYN LVAAPVVDTD DRLVGVITID DVVDVIEEEA DEDLKALGGV SSGEELSDRV
WTIARSRFNW LLVNLATAFL ASSVLGLFEG ALEQMVALAV LAPIVASQGG NAATQTMTVA
VRALATRELG SSNAYRVVMR ELLVGLVNGI GFAIITGLAA YAWFRVPGLG VVIGLAMVTN
LVAGALGGIL IPIALDRFRV DPAVASGTFV TTVTDVVGFF AFLGIATLWF GLK
|
|---|
| |