| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2355 |
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| Symbol | |
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| ID | 3909353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2705490 |
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| End bp | 2707682 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637884252 |
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| Product | Pyrrolo-quinoline quinone |
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| Protein accession | YP_485971 |
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| Protein GI | 86749475 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0680369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.367457 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGC CTGCCGTGTC GGTGTGGTTT GCGCACCGAT TCCTCCGCGA CAACGCGACA
TCACGATCCG CAACATCCAC AAAGAGAGAC CTGAAACTCG GTGCCGCCGC GCTGATCGCC
GCGGCACTGT TTCACGGCGG CGCGTTCGCG CAGAACGCGA AGGGCTCCGC CGATCATATC
CGCGCCGCGA CCGGCGCGAT CGACAGCGCC GCCATCATCG CCAACGCCAA GACCACCAAC
GACTGGCCGA GCTACGGGCT CGACTACGCG GAGACGCGCT TCAGCAAGCT CGACCGGATC
AATGTCGACA ACGTCAAGCA GCTCGGCCTG CAGTGGAGCT ACAGTCTTGG TTCGGATCGC
GGCGTCGAGG CGACACCGGT GGTGGTCGAC GGCATCATGT ACGTCACCGC GTCGTGGAGC
GTTGTTCACG CGGTCGATAC CCGGACCGGC AAGAAGCTGT GGACCTACGA CCCCGGCGTC
GACCGCTCGA AGGGCTATCG CGGCTGCTGC GACGTCGTGA ACCGCGGCGT CGCGCTGTAC
AAGGGCAAGG TGTTCGTCGG CGCCTATGAC GGACGCCTCG TCGCGCTGGA TGCCGCGACC
GGCAAGGTGG TCTGGGAAAA GGACACCGTG ATCGACCACG GCTATTCCTA CACCATCACC
GGCGCGCCGC GGGTGTTCAA CGGCAAGGTG GTGATCGGCA ATGGCGGCGC CGAATACGGC
GCGCGCGGCT ACGTCACCGC TTACGACGCG GAGACCGGCA ACCAGGCCTG GCGCTGGTTC
ACGGTGCCCG GTGATCCGTC GAAGCCGTTC GAGGACGCCT CGATGGAAGC GGCGGCCAAG
ACCTGGGATC CGGCCGGCAA ATGGTGGGTC AATGGCGGCG GCGGCACCGC GTGGGACAGC
ATCACCTTCG ATCCCGACCT CAACATGGTC TATATCGGCA CCGGCAACGG CTCGCCCTGG
GCCCGGCATC TGCGCAGTCC CGCCGGCGGC GACAATCTGT ATCTCGGTTC GATCGTGGCG
CTGAACGCCG ACACCGGCAA GTACGTCTGG CACTATCAGG AGACGCCCGG CGACAATTGG
GACTACACCT CGACCCAGCC GATGATCCTG GCCGATCTCA CCATCGACGG CCAGCCGCGC
AAGGTGGTGC TGCACGCGCC GAAGAACGGC TTCTTCTTCG TGATCGACCG CACCAACGGC
AAGTTCATCT CGGCCAAGAA CTTCGTCGAG GTGAACTGGG CGACCGGCTA CGACGCCAAC
GGCCGGCCGA TCGAAAATCC GGAAGCGCGC GACCCGACCA AATCGTTCGA CAGCATTCCG
GGCCCGTACG GCGCGCACAA CTGGCACCCG ATGTCGTTCA ATCCGCAGAC CGGGCTGGTG
TATCTGCCGG CGCAAGGCGT ACCCATCAAT CTGACGGGTG AGAAAGCGCT GACCCAGAAC
AAGATGGAGC CGTTCAAATT CGGCAGCACC ACCGGCTGGA ACGTCGGCTT CACGCTGAAC
GCCGTGCCGC CGAAGAACCT GCCGTTCGGC CGGCTGCTGG CGTGGGATCC GGTGCAGCAG
AAGGAGGTCT GGCGCGCCGA ATATGTCGCG CCATGGAACG GCGGCACGCT CACCACCGCG
GGCAATCTGG TGTTCCAGGG CACCGCGGAC GGGCGCTTCG TCGCCTACAA CGCCAAGACC
GGCGAGAAGC TCTGGGAAAG CCCGCTCGGC ACCGGCGCGG TGGCGGCGCC GGCCACCTAC
ATGGTCGACG GCGTGCAATA CGTCTCGATC GCGGTCGGCT GGGGCGGCGT GTTCGGCATC
AGCCAGCGCG CCACGGAGAA GGAAGCGCCG GGCACGGTCT ACACCTTCGC GGTGGGCGGC
AAGGCGCCGA TGCCGGAATT CACCAAGTAT CAGATGGGCA ATCTGCTGAC CGGGATCGAA
TACGATCCGA AGGACGTGCC GGAAGGCACC GCGATCTATG TCGCGGCCTG CGCCACCTGC
CACGGCGTGC CGGGCGTTGA CCGCGGCGGC AACGTCAAGA ATCTCGGCTA CACGTCGACC
GAGAACATCG CCCATCTGAA GGACATCGTG TTCAAGGGCC CGTACCGCGA CAAGGGCATG
CCGGACTTCA CCGGCAAGCT CACCGAGGCG GATGTGGTCA AGATCCAGGC CTTCATCCAG
GGCACCGCGG ACGCGATCCG GCCGAAGAAA TAG
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| Protein sequence | MKQPAVSVWF AHRFLRDNAT SRSATSTKRD LKLGAAALIA AALFHGGAFA QNAKGSADHI
RAATGAIDSA AIIANAKTTN DWPSYGLDYA ETRFSKLDRI NVDNVKQLGL QWSYSLGSDR
GVEATPVVVD GIMYVTASWS VVHAVDTRTG KKLWTYDPGV DRSKGYRGCC DVVNRGVALY
KGKVFVGAYD GRLVALDAAT GKVVWEKDTV IDHGYSYTIT GAPRVFNGKV VIGNGGAEYG
ARGYVTAYDA ETGNQAWRWF TVPGDPSKPF EDASMEAAAK TWDPAGKWWV NGGGGTAWDS
ITFDPDLNMV YIGTGNGSPW ARHLRSPAGG DNLYLGSIVA LNADTGKYVW HYQETPGDNW
DYTSTQPMIL ADLTIDGQPR KVVLHAPKNG FFFVIDRTNG KFISAKNFVE VNWATGYDAN
GRPIENPEAR DPTKSFDSIP GPYGAHNWHP MSFNPQTGLV YLPAQGVPIN LTGEKALTQN
KMEPFKFGST TGWNVGFTLN AVPPKNLPFG RLLAWDPVQQ KEVWRAEYVA PWNGGTLTTA
GNLVFQGTAD GRFVAYNAKT GEKLWESPLG TGAVAAPATY MVDGVQYVSI AVGWGGVFGI
SQRATEKEAP GTVYTFAVGG KAPMPEFTKY QMGNLLTGIE YDPKDVPEGT AIYVAACATC
HGVPGVDRGG NVKNLGYTST ENIAHLKDIV FKGPYRDKGM PDFTGKLTEA DVVKIQAFIQ
GTADAIRPKK
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