Gene RPB_2350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2350 
Symbol 
ID3909348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2700822 
End bp2701970 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content67% 
IMG OID637884247 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_485966 
Protein GI86749470 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.731467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.759568 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACAATAA GAGGCAAGGC TTTCATTGCC GGAATTTACG AACACCCCAC GCGCCACGCG 
CCTGACAAAT CCATCGCCCA GCTCCACGCC GAAGTCGCCA AAGGCGCGCT CGAAGACGCC
GGCCTGACCA AGGACGACAT CGACGGCTAT TTCTGCGCCG GCGATGCACC GGGCGGCGGG
ATGGCGATGG TGGATTATCT CGGGCTGAAA GTCCGCCACC TCGACACCAC CGACACCGGC
GGCTCCTCCT ATCTGATCCT TCTCGCCCAC GCCGCGGAGG CGATCGCGGC CGGCCGCTGC
TCGGTGGCGT TGATCACGCT GGCCGGCAAG CCGCGGACCG GCGCGCTGCC GCCGCGTCCG
GTCGGCGCCG AGGGTGATTT CGAGCTGGCC TATGGCGCGA CGACGCACAA TGTCTATGCG
ATGTGCGCGG CGCGCCACAT GCACGACTAC GGCACCACGT CGGAGCAGCT CGCCTGGATC
AAGGTCGCGG CCTCGCATCA CGCGCAATAC AACGAGCACG CGATGCTGCG CGACGTCGTC
ACTGTCGAAG ACGTGCTGAA CTCGCCGCTG ATCGCCGACC CGCTGCATCG GCTCGACTGC
TGCGTCGTCA CCGACGGCGG CGGCGCGCTG ATCGTCACGT CCGAGGCGAT CGCGCGCAGC
CTGAAGCGGC CGCTGGTGCG GTTGATCGGC GCCGGCGAGG CGGTCAAGGG GCCGCGCGGC
GGGCAGAAGC TCGACCTGAC CTATTCGGCG GGCGTGTGGT CGGCGCCGCC GGCCTTCGAG
ATGGCCGGCA TCACCCCGAA GGATATCAAA TACGCCTCGA TCTACGACAG CTTCACCATC
ACCGTGCTGA TGCAGCTCGA AGACCTCGGC TTCTGCAAGA AAGGCGAGGG CGGCAAGTTC
GTCGCCGACG GCAATCTGAT TTCCGGCGTC GGCAAGCTGC CGTTCAACAC CGATGGCGGC
GGACTGTGCA GCAATCATCC GGTGAATCGC GGCGGCATGA CCAAGATTCT GGAAGCCGTG
CGCCAGCTCC GCGGCGAAGC GCATCCCAAG GTGCAGGTGC CGAACTGCGA CCTCGCCATC
GCCCACGGCA CCGGCGGCAT GCTCGGCATC CGCCACGCCG CATCTACCTG CATTCTGGAG
CGCGTGTGA
 
Protein sequence
MTIRGKAFIA GIYEHPTRHA PDKSIAQLHA EVAKGALEDA GLTKDDIDGY FCAGDAPGGG 
MAMVDYLGLK VRHLDTTDTG GSSYLILLAH AAEAIAAGRC SVALITLAGK PRTGALPPRP
VGAEGDFELA YGATTHNVYA MCAARHMHDY GTTSEQLAWI KVAASHHAQY NEHAMLRDVV
TVEDVLNSPL IADPLHRLDC CVVTDGGGAL IVTSEAIARS LKRPLVRLIG AGEAVKGPRG
GQKLDLTYSA GVWSAPPAFE MAGITPKDIK YASIYDSFTI TVLMQLEDLG FCKKGEGGKF
VADGNLISGV GKLPFNTDGG GLCSNHPVNR GGMTKILEAV RQLRGEAHPK VQVPNCDLAI
AHGTGGMLGI RHAASTCILE RV