Gene RPB_2342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2342 
Symbol 
ID3909340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2690126 
End bp2691658 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content65% 
IMG OID637884239 
Productcarboxyl transferase 
Protein accessionYP_485958 
Protein GI86749462 
COG category[I] Lipid transport and metabolism 
COG ID[COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.150986 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACA TCCTTGAAGC ACTCGACGAA CGCCGGGCGG CGGCCAAACT CGGCGGCGGC 
GAGAAGCGCA TCGACGCGCA GCACGCCCGC GGCCGGCTCA CCGCTCGGGA GCGCATCGAC
CTGCTGCTCG ACAAGCATTC GTTCGAGGAG ATGGACATGT TCGTCCAGCA CCGCTCGACC
GAATTCGGGA TGGAGAACAC CAAAATTCCG GGTGACGGTG TGGTCACCGG CTGGGGCACC
GTCAACGGCC GCAAGACCTT CGTGTTCGCC AAGGACTTCA CCGTGTTCGG CGGCTCGCTG
TCGGAGACCC ACGCCGCCAA GATCACCAAG ATCCAGGACA TGGCGCTGAA GGCCCGCGCC
CCGATCATCG GCCTGTACGA CGCCGGCGGC GCGCGCATCC AGGAGGGCGT CGCGGCCCTC
GCCGGTTACT CTTACGTGTT CCGCCGGGTG GTGCAGGCCT CCGGCGTGAT CCCGCAGATC
AGCGTCATCA TGGGCCCCTG CGCCGGCGGC GACGTCTACG CCCCGGCGAT GACCGACTTC
ATCTTCATGG TGAAGAACAC CAGCTACATG TTCGTCACCG GCCCCGACGT GGTGAAGACC
GTGACCAACG AAGTCGTCAC GCCGGAAGAG CTCGGCGGCG CCTCGGTCCA CGCCACCCGC
TCCTCGATCG CCGACGGCGC GTTCGAGAAC GACGTCGAGA CGCTGCTGCA GATGCGCCGG
CTGCTCGACT TCCTGCCCGC CAATTCGTCG GACGGCGTGC CGGAATGGCC GAGCTTCGAC
GATATCGAGC GCGAGGACTT CTCGCTCGAC ACGCTGATCC CGGACAATCC GAACAAGCCC
TACGACATGA AGGAGCTGAT CCTGAAGGTC GTCGACGAGG GCGACTTCTT CGAATTGTCG
GACGCCTTCG CCAAGAACAT CATCACCGGT TTCGGCCGTA TCGCCGGCCG CACCGTCGGC
TTCGTCGCCA ACCAGCCGAT GGTGCTGGCG GGCGTGCTCG ACTCGGACGC CTCGCGCAAG
GCGGCGCGGT TCGTGCGGTT CTGCGACAGC TTCAACATCC CGATCGTCAC CTTCGTCGAC
GTGCCGGGCT TCCTGCCCGG CACCGCGCAG GAATATGGCG GGCTGATCAA GCACGGCGCG
AAGCTCCTGT TCGCGTTCTC GCAATGCACC GTGCCGCTGG TGACGCTGAT CACCCGCAAG
GCCTATGGCG GCGCGTTCGA CGTGATGGCC TCCAAGGAAA TCGGCGCCGA TATCAACTAC
GCTTGGCCGA CCGCGCAGAT CGCGGTGATG GGCGCCAAGG GCGCGGTCGA GATCATCTTC
CGTCAGGACA TGAACGATCC CGACAAGATC GCCGCCCGCA CCAAGGAATA CGAAGACCGC
TTCCTGTCGC CCTTCATCGC CGCCGAACGC GGCTACATCG ACGACGTGAT CATGCCGCAT
GCGACGCGGC GGAGGATCGC GCGCGCGCTG GCGATGCTGC GCGACAAGCA CGTCGACCTG
CCGCTGAAGA AGCACGACAA TATGCCGTTG TGA
 
Protein sequence
MKHILEALDE RRAAAKLGGG EKRIDAQHAR GRLTARERID LLLDKHSFEE MDMFVQHRST 
EFGMENTKIP GDGVVTGWGT VNGRKTFVFA KDFTVFGGSL SETHAAKITK IQDMALKARA
PIIGLYDAGG ARIQEGVAAL AGYSYVFRRV VQASGVIPQI SVIMGPCAGG DVYAPAMTDF
IFMVKNTSYM FVTGPDVVKT VTNEVVTPEE LGGASVHATR SSIADGAFEN DVETLLQMRR
LLDFLPANSS DGVPEWPSFD DIEREDFSLD TLIPDNPNKP YDMKELILKV VDEGDFFELS
DAFAKNIITG FGRIAGRTVG FVANQPMVLA GVLDSDASRK AARFVRFCDS FNIPIVTFVD
VPGFLPGTAQ EYGGLIKHGA KLLFAFSQCT VPLVTLITRK AYGGAFDVMA SKEIGADINY
AWPTAQIAVM GAKGAVEIIF RQDMNDPDKI AARTKEYEDR FLSPFIAAER GYIDDVIMPH
ATRRRIARAL AMLRDKHVDL PLKKHDNMPL