| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2339 |
|---|
| Symbol | |
|---|
| ID | 3908970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 2688121 |
|---|
| End bp | 2688390 |
|---|
| Gene Length | 270 bp |
|---|
| Protein Length | 89 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637884236 |
|---|
| Product | type III secretion proteins, related to flagellar biosynthesis protein FlhB |
|---|
| Protein accession | YP_485955 |
|---|
| Protein GI | 86749459 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1377] Flagellar biosynthesis pathway, component FlhB |
|---|
| TIGRFAM ID | [TIGR00789] flhB C-terminus-related protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0300907 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.34109 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGTCA GTATCAAGAA CCAGATCGCG GTCGCGCTGT ACTACGACAA AGGCGGCGCG
CCGCGCGTCG TCGCCAAGGG CAGGGGCACG ATCGGCGCCA AGATCATCGA GGTCGCGAAG
GAGCACAATG TTCCGATCGA GGAGAACGAA GTGCTGGCCG GGGCACTGTC GCATGTCGAA
CTCGGCGACG AGATCCCCGA AGAACTCTAC AAGGCGGTGG CCGAGGTGCT GGTGTTCGTG
CTGAAACTGT CGGGCCGGAC GCCGGGCTAA
|
|---|
| Protein sequence | MTVSIKNQIA VALYYDKGGA PRVVAKGRGT IGAKIIEVAK EHNVPIEENE VLAGALSHVE
LGDEIPEELY KAVAEVLVFV LKLSGRTPG
|
|---|
| |