Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2304 |
Symbol | rpsQ |
ID | 3908935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 2658883 |
End bp | 2659131 |
Gene Length | 249 bp |
Protein Length | 82 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637884201 |
Product | 30S ribosomal protein S17 |
Protein accession | YP_485920 |
Protein GI | 86749424 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0186] Ribosomal protein S17 |
TIGRFAM ID | [TIGR03635] 30S ribosomal protein S17 |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000928394 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.101475 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAAGA GGACCCTGCA GGGCGTGGTC GTCAGCGACA AGCAAGCCAA GACCGTGGTG GTGCGCGTCG ACCGTCGCTT CACCCACCCG ATCTACAAGA AGACGATCCG GCGCTCGAAG AACTACCACG CGCACGACGA GAACGATCAG TTCCATCCGG GCGACATGGT GTGGATCGAG GAGAGCAAGC CGATCTCCAA GTTGAAGCGC TGGACCGTGG TCCGGGGCGA ACCGAAGAAG ACCGCCTAA
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Protein sequence | MPKRTLQGVV VSDKQAKTVV VRVDRRFTHP IYKKTIRRSK NYHAHDENDQ FHPGDMVWIE ESKPISKLKR WTVVRGEPKK TA
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