| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2301 |
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| Symbol | rpsC |
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| ID | 3909682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2657511 |
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| End bp | 2658209 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637884198 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_485917 |
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| Protein GI | 86749421 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.371999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.117163 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTCAAA AGATCAATCC GATCGGGCTG CGGCTGGGCA TCAACCGGAC GTGGGATTCC
CGTTGGTTCG CCGGCAAGAA CGAGTACGGC AAGCTGCTGC ACGAGGACGT CAAGATCCGT
GAGATCCTGC ACAAGGAATT GAAGCAGGCC GCGGTGGCGC GCATCGTGAT CGAGCGCCCG
CACAAGAAGT GCCGGGTGAC GATCCACTCC GCGCGCCCGG GCGTCGTGAT CGGCAAGAAG
GGCGCCGACA TCGACAAGCT GCGCAAGAAG GTCGCCGACA TCACCGCGTC GGACGTCGTC
ATCAACATCG TCGAAATCCG CAAGCCGGAG CTCGACGCCA CGCTGGTCGC CGAATCGATC
GCGCAGCAGC TCGAGCGCCG CGTCGCGTTC CGCCGCGCGA TGAAGCGGGC GGTGCAGTCG
GCGATGCGTC TCGGCGCCGA GGGCATCCGG ATCAACTGCT CGGGCCGTCT CGGCGGCGCC
GAAATCGCGC GCATGGAGTG GTATCGCGAA GGTCGCGTGC CGCTGCACAC GCTGCGCGCC
GACATCGATT ACGGCGTCGC GACCGCGTTC ACCACCTTCG GCACCTGTGG CGTCAAGGTG
TGGATCTTCA AGGGCGAGAT CCTCGAACAC GATCCGATGG CGCAGGACAA GCGTATGGCC
GAAGGCGACA ATTCCCGCCC GCGCCGCGAC GCTGCCTGA
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| Protein sequence | MGQKINPIGL RLGINRTWDS RWFAGKNEYG KLLHEDVKIR EILHKELKQA AVARIVIERP
HKKCRVTIHS ARPGVVIGKK GADIDKLRKK VADITASDVV INIVEIRKPE LDATLVAESI
AQQLERRVAF RRAMKRAVQS AMRLGAEGIR INCSGRLGGA EIARMEWYRE GRVPLHTLRA
DIDYGVATAF TTFGTCGVKV WIFKGEILEH DPMAQDKRMA EGDNSRPRRD AA
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