| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2296 |
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| Symbol | rplD |
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| ID | 3909677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2655034 |
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| End bp | 2655654 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637884193 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_485912 |
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| Protein GI | 86749416 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.214587 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAATTGA AAGTCACCAC TCTCGAGGGT CAGGAAGCCG GCTCGGTCCA GCTCTCCGAC
GCCATCTTCG GTCTCGAGCC GCGCAACGAC ATTGTGCAGC GCTGCGTGAT CTGGCAGCTC
GCCAAGCGTC AGGCCGGCAC CCACAAGGCC AAGGGCCGCG CCGAAGTCTG GCGCACCGGC
AAGAAGATGT ACAAGCAGAA GGGCACCGGC GGTGCTCGTC ACGGTTCGCA GCGCGTGCCG
CAGTTCCGCG GCGGTGGCCG TGCGTTCGGT CCGGTGGTGC GTTCGCACGC CATCGACCTG
CCGAAGAAGG TCCGTGCGCT GGCGCTGCGC CACGCGCTGT CGGCCAAGGC CAAGGGCGGC
GGGCTGATCG TGATCGACAA GGCCGAGCTT GAAGCCGCGA AGACCAAGGC TTTGGTCGGA
GCGTTCTCCG GCCTTGGTCT GACCAACGCG CTGATCATCG ACGGCGCCGA GGTCAACACC
GGGTTCGCCA CGGCGGCCCG CAACATCCCG AACATCGACG TGCTGCCGAT CCAGGGCATC
AACGTCTACG ATATCGTGCG CCGTCGGAAG TTGGTTCTGA CGAAGGCCGC TCTCGATGCG
TTGGAGGCGC GCTTCAAATG A
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| Protein sequence | MELKVTTLEG QEAGSVQLSD AIFGLEPRND IVQRCVIWQL AKRQAGTHKA KGRAEVWRTG
KKMYKQKGTG GARHGSQRVP QFRGGGRAFG PVVRSHAIDL PKKVRALALR HALSAKAKGG
GLIVIDKAEL EAAKTKALVG AFSGLGLTNA LIIDGAEVNT GFATAARNIP NIDVLPIQGI
NVYDIVRRRK LVLTKAALDA LEARFK
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