| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2176 |
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| Symbol | |
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| ID | 3909956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2470302 |
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| End bp | 2470511 |
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| Gene Length | 210 bp |
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| Protein Length | 69 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637884070 |
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| Product | cold-shock DNA-binding domain-containing protein |
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| Protein accession | YP_485793 |
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| Protein GI | 86749297 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.141033 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0176419 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGACAG GGACCGTGAA GTGGTTCAAT GGACAAAAGG GCTTCGGCTT TATCGCGCCG
AACGACGGTG GCAACGATGT GTTCGTGCAC ATCAGCGCCG TTGAGCGCGC CGGGCTTTCG
GGCCTCGCCG AAGGCCAGAA GGTCAATTTC GAGCTCAAGA CCGACAAGAT GCGCGGTAAG
ACGAGCGCGG AAAATCTCGA GCTGGTCTGA
|
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| Protein sequence | MPTGTVKWFN GQKGFGFIAP NDGGNDVFVH ISAVERAGLS GLAEGQKVNF ELKTDKMRGK
TSAENLELV
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