| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2162 |
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| Symbol | |
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| ID | 3909942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2453392 |
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| End bp | 2454810 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637884056 |
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| Product | peptidase C14, caspase catalytic subunit p20 |
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| Protein accession | YP_485779 |
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| Protein GI | 86749283 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0611523 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACGGG CAGTGCGGCT GCTGCTGGCG CTTTTCATGA TGGCGTCGTG TTCGGCGGCC
TGGGCCGAGA CCCGGGTTGC GCTGGTCGTC GGCAATTCTG CCTATCGTCA CGTCACCGCC
CTCGACAATC CGATCAAGGA CGCCGCTCTG ATGGTCGAGA CGTTGAGGCG TCTCGGCTTC
AGGCTTGTCG GTGGCGGCGC GCAGCTCGAC GTCGACAAGG CGCGGTTCGA CACGCTGGTG
CAGCAGTTCG GCCGCGACGC CGCCGGCGCC GATGTCGGGC TGTTCTACTA TGCGGGCCAT
GGCGTGCAGA TTCGTGGCGT CAATTATCTG GTGCCGGTCG GCGCCAACCC GACGCGCGAG
GCCGACGTCG ATTTCCAGAT GCTCGATGTC GGGCTGGTGC TGCGGCAGAT GGAGAGTGCC
GGCACGCGGC TCAACATCGT CCTGCTCGAC GCCTGCCGCA ACAACCCGTT CGGTGGTCGG
GGGCTGCGCG CCGCCGGCGG CGGTTTGGCG CAGATGCAGG CGCCCGAGGG CACGCTGATT
TCTTACGCGA CCCAGCCCGG CAACGTCGCC CAGGACGGCG ACGACGGCCA CAGTCCCTAT
ACGCGGGCCC TGGCCGAGAT CATGACGCGG CCGGGGCTCG ACATCTTTCA GACCTTCAAC
CGCGTCGGGT TGGCCGTGAA AAAGGCGACC GCCAGCGCTC AGCAGCCGTG GCTGTCGTCG
TCGCCGATCC AGGGCGACTT CTATTTCTCC GGCCAGGCTG CCGCTGCGGC CGCCGCGCCG
ACGTCTCCTC AGACAGCCGC GGTCGCGCCG CCGGAGTCAC CCGGGCTTTC ACCCGCGAGG
CCGGCCGAGC CGGTCACGGC GCCGAATCCG TCGCCCTCGA TCTCGTCGTC GCCGCCGCCG
CGCCGGGGTT TCCGCGTGCT CGATAGCGTC TCCGAAGGCA TCCTCAACAT GCGCTCCGGG
CCCGGCACGG GTCATCCGAT CGTGGTTGCG ATTCCGGCTG GCAGCACGGG CGACTCCAAG
GGGAACTGCC GTGCGCCGGA TGATGGCGGC CGCCATCCTT GGTGCGAGGT CGAATGGCGC
GGCCGCACCG GCTGGGTCTC GAGCCGATCG ATCGTCGAGA CACGCCGCGA CGAGGCCGCA
CCGCCTCAAG CAAAGTCGCG TGCGCGGCCT GTGTTCCGCG TGCTCGGCAG CGTGTCGCAA
GGCATCCTCT ATGTGCGCGC CGGCCCGGGC ACGGGTCACC CGGCCTTGTT CTCCATTCCG
GCCGGTGCGT CCGGCATCCA GCTCGGGCGC TGCCGCAGCT CCGAAGACGG TGTGGGCGCG
CCGTGGTGCG AGGTCGAATG GGGCGGGCGC GCCGGCTGGG CCTCGGCCTG CTGCATGGTC
GATGCCGCGA CCGGCGCCTT CGCAACGGTG CGGGATTGA
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| Protein sequence | MERAVRLLLA LFMMASCSAA WAETRVALVV GNSAYRHVTA LDNPIKDAAL MVETLRRLGF
RLVGGGAQLD VDKARFDTLV QQFGRDAAGA DVGLFYYAGH GVQIRGVNYL VPVGANPTRE
ADVDFQMLDV GLVLRQMESA GTRLNIVLLD ACRNNPFGGR GLRAAGGGLA QMQAPEGTLI
SYATQPGNVA QDGDDGHSPY TRALAEIMTR PGLDIFQTFN RVGLAVKKAT ASAQQPWLSS
SPIQGDFYFS GQAAAAAAAP TSPQTAAVAP PESPGLSPAR PAEPVTAPNP SPSISSSPPP
RRGFRVLDSV SEGILNMRSG PGTGHPIVVA IPAGSTGDSK GNCRAPDDGG RHPWCEVEWR
GRTGWVSSRS IVETRRDEAA PPQAKSRARP VFRVLGSVSQ GILYVRAGPG TGHPALFSIP
AGASGIQLGR CRSSEDGVGA PWCEVEWGGR AGWASACCMV DAATGAFATV RD
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