| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2127 |
|---|
| Symbol | |
|---|
| ID | 3908542 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 2420263 |
|---|
| End bp | 2421366 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637884021 |
|---|
| Product | filamentation induced by cAMP protein Fic |
|---|
| Protein accession | YP_485744 |
|---|
| Protein GI | 86749248 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3177] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.296141 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTGGA ATTGGGAGGA CCCGAACTGG CCCGTATTTT CTTACGAAGC CAGAGGGTTA
GAGAAGTTTG AAAGCGATTT TCTCTTGCGC TCCGGAGAGT TTATCGGAGC CTTCAAACAT
GTCAGCCAGG ATGAACAGAC CAACCTCCGC ATCGACTTGA TCAGCGAGGA AGCCCTCAAG
ACCTCCGAGA TCGAAGGGGA GATCCTGAGC CGCGATAGCG TGCAGTCCTC GCTTCGCTAT
CAGTTCGGCC TCGCGAAGGA TCGACCTGAC GTGCCAGCGG CCGAACGCGG CATCGCTGAG
ATGATGGCCG ATCTGTATCG CAGATTCGCC GAGCCTCTCA CCCATGAGAC GCTGTTCGGG
TGGCACCAGA TGCTCATGGC GGGAACGAAC TCGATTCGGG TGGTTGGCGC CTACAGGACT
CACACCGATC CCATGCAGGT CGTGTCGGGA CCGATCGCGC ATCGTAGAGT CCACTTCGAA
GCACCGCCGT CTGAGCGCGT GACGGAGGAG ATGACGGCTT TCATCGATTG GTTCAACGAA
ACCGCTCCCG ATGGCCCCCA AGCGCTGCCC GCGCTCACAC GCGCCGGGCT TGCTCACCTC
TACTTTGTCA GCATTCACCC GTTTGAAGAT GGCAACGGAC GGATCGGGCG TGCCTTGGCT
GAAAAATCAC TGGCCCAAAA CCTCAACCAG CCGACGCTCA TCGCCCTCGC CTACACCATC
CAACGCAAGC GGAAAGCCTA CTACGACGCG TTGGAGCACA ATAACAAGTC GACCGAGGCC
ACCGACTGGC TGGTCTATTT CGGGAAGACG GTCCTTGAAG CTCAGGACAA CACCAACAAG
CGGGTCGATT TCTCCCTGGC CAAGACTCGA TTCTACGAGC GCCTGCGCGG CCAATTGAAC
GACAGACAAG AGAAGGCCAT CGCGCGCATG TTCGAGGAAG GGATCGAAGG CTTCAAAGGC
GGCATGAGCG CCGAGAACTA TATCACCATC ACCAAGGCGA CCCGCTCCAC CGCCACGCGT
GATCTGCAAG ACCTCGTTGC AAAGGAAGCC CTCACCCGGA CGGGTGAACT GCGCTATAGC
CGTTATCACC TGAAGCTGGA CTGA
|
|---|
| Protein sequence | MPWNWEDPNW PVFSYEARGL EKFESDFLLR SGEFIGAFKH VSQDEQTNLR IDLISEEALK
TSEIEGEILS RDSVQSSLRY QFGLAKDRPD VPAAERGIAE MMADLYRRFA EPLTHETLFG
WHQMLMAGTN SIRVVGAYRT HTDPMQVVSG PIAHRRVHFE APPSERVTEE MTAFIDWFNE
TAPDGPQALP ALTRAGLAHL YFVSIHPFED GNGRIGRALA EKSLAQNLNQ PTLIALAYTI
QRKRKAYYDA LEHNNKSTEA TDWLVYFGKT VLEAQDNTNK RVDFSLAKTR FYERLRGQLN
DRQEKAIARM FEEGIEGFKG GMSAENYITI TKATRSTATR DLQDLVAKEA LTRTGELRYS
RYHLKLD
|
|---|
| |