Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2038 |
Symbol | |
ID | 3909853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 2317549 |
End bp | 2318721 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637883931 |
Product | HflK protein |
Protein accession | YP_485656 |
Protein GI | 86749160 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.989603 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.793303 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTGGA AGAATCAAGG CGGAGGACCG TGGGGTTCTG GTCCGAAGGG GCCATGGGGC TCCGGGCCGC AATCATCGGG ATCGGGGCCG CGGCCGCCTG ACCTGGAAGA TCTGCTCCGT CGCGGCCAGG ACCGGCTTCA GCAGTTGCTT CCCGGCGGTT ATTTCAGCGG TCTCGGCATC GCCATCGCGG TGCTCGGCGC GCTGACGATC TGGGGCCTGT CCGGGTTCTT CCGGGTACAG TCCGAAGAAC TCGGCGTCGT GCTGCGCTTC GGCAAGCATG TCCGCACCGT TCAGCCGGGC CTGAATTATC ATCTGCCGTA TCCGATCGAG ACCGTACTGC TGCCGAAGGC GCTGCGCGTG TCGACGATCA GTATCGGCAT GACGATGATC AACGACCCCG CGCGGCGCGG CACGACGGTG CGTGACGTTC CCGAAGAGAG CCTGATGCTG ACCGGCGACG AGAACATCGT CGACGTCGAC TTCGCCGTGC TGTGGCGGAT CAAGCCCGAC GGCGTCGGCA ATTTCCTGTT CAACATCCAG AACCCGGAAG GCACCGTGAA GGCCGTCGCC GAAAGCGCGA TGCGCGAAGT GATCGGCCGC TCCAACATCC AGCCGATCCT GACCGGCGCC CGAACCACGA TCGAGGGCGG CGTCCAGGAA CTGATGCAGA AGACGCTCGA CGGCTACGGC GCCGGCGTTC TCATCCAGCA GGTGCAGATG CAGAAGGTCG ACCCGCCGCT GCAGGTCATC GACGCGTTCC GCGACGTGCA GGCGGCGCGC GCCGACCTCG AGCGGCTGCA GAACGAGGCG CAGACCTACG CCAACCGGGT CATCCCGGAC GCCAAGGGTC GCGGCGCCCA GATCATCCAG GCCGCCGAAG GCTACAAAGG ACAGGCGGTC GCCGAGGCCA AGGGCCAGAG CGCGCGCTTC CTCGACGTCT ATGAAGAATA CAGGAAGGCG CCCGACGTGA CCCGTCAGCG GATCTATCTC GAAACCATGG AGCGTGTGCT CGGCCCGGCC GAGAAGCTCG TTTACGATTC GGGGTCTGGC CCCGGGGGAG GCCAGGGCAT CGTGCCGTAT CTGCCGCTGA GTGAGTTGAG CCCGCGCCGC ACGGCGCCGG CTACACCGAC GCAGCCGCAG AACCAGCAGA CCCAGGGCGG AGGCAGCCGA TGA
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Protein sequence | MPWKNQGGGP WGSGPKGPWG SGPQSSGSGP RPPDLEDLLR RGQDRLQQLL PGGYFSGLGI AIAVLGALTI WGLSGFFRVQ SEELGVVLRF GKHVRTVQPG LNYHLPYPIE TVLLPKALRV STISIGMTMI NDPARRGTTV RDVPEESLML TGDENIVDVD FAVLWRIKPD GVGNFLFNIQ NPEGTVKAVA ESAMREVIGR SNIQPILTGA RTTIEGGVQE LMQKTLDGYG AGVLIQQVQM QKVDPPLQVI DAFRDVQAAR ADLERLQNEA QTYANRVIPD AKGRGAQIIQ AAEGYKGQAV AEAKGQSARF LDVYEEYRKA PDVTRQRIYL ETMERVLGPA EKLVYDSGSG PGGGQGIVPY LPLSELSPRR TAPATPTQPQ NQQTQGGGSR
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