| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2005 |
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| Symbol | lpxC |
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| ID | 3909511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2279263 |
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| End bp | 2280225 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637883899 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_485624 |
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| Protein GI | 86749128 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.162429 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATTCA GCCGGCAGAC AACGCTGCGA TCGCAAGCCA CGGTCACTGG CGTCGGTGTC
CACTCCGGTC GTCCGGCCAC GCTCTCCATC GGACCCGCCT CCATCGACGC GGGTTATATT
TTTGTCCGCA GCGGTCTCGA CGGCGGTGAC CGCGAAATCC AGGCCAATGC CAAATCGGTG
GTCGCCACCG AACTCGCCAC CGTGCTGGGC GATAGCGACG GCCCGCTGGT TTCGACGGCC
GAGCACGTCC TTGCCGCGCT GCGCGGCATG GGCATCGACA ATGCCACCAT CGAAGTCGAC
GGCCCCGAAG TGCCGATCAT GGACGGCAGC GCCGCGCCTT TCGTTGCCGC GATCGACCAG
GCCGGCATCC GCGAGCAATC GGCGCCGCGC CGCTTCATCC AGGTTCTCAA GCCGGTCCGC
GTGTCGCACG GCGACTCGTT CGGCGAGCTT CGCCCCTATA CCGGTGGTTT CCGCGTCGAG
GTCGACATCG ACTTCGCCAA TCCGGTCATC GGTCAGCAGA ATTACAGCCT CGGCGTCGAG
CCGGAAGCCT TCCGCCGCGA AATCGCCCGC GCCCGCACCT TCGGCTGCAT GAGCGACGTC
GCCCGGCTGT GGGAAATGGG CTACGCGCTC GGCGCGTCGT TCGAGAATTC GGTGGTGTTC
GACGACGAGC GGCTGCTCAA CGCCGAAGGC CTGCGCTATG CCGACGAATG CGCCCGCCAC
AAGCTGCTCG ACGCGATCGG CGATCTGGCG CTGGCGGGTC TGCCGATTCT GGGCGCCTAT
CGCTCGATGC GGGGTGGCCA CAAGCTCAAC CATTCGGTGC TGACCGCGCT TCTGGCCGAT
CGCACCAACT TCCGAGTGAT CGAAGCCGAG CCGGCGCGCC GCGCGGTGCG GGGCCACGCC
GAAGCCGTCA CCCGCCTGGC CGGCGGCATG GTCGCCCCGG CCTACGGTCC GGATATGTCC
TGA
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| Protein sequence | MKFSRQTTLR SQATVTGVGV HSGRPATLSI GPASIDAGYI FVRSGLDGGD REIQANAKSV
VATELATVLG DSDGPLVSTA EHVLAALRGM GIDNATIEVD GPEVPIMDGS AAPFVAAIDQ
AGIREQSAPR RFIQVLKPVR VSHGDSFGEL RPYTGGFRVE VDIDFANPVI GQQNYSLGVE
PEAFRREIAR ARTFGCMSDV ARLWEMGYAL GASFENSVVF DDERLLNAEG LRYADECARH
KLLDAIGDLA LAGLPILGAY RSMRGGHKLN HSVLTALLAD RTNFRVIEAE PARRAVRGHA
EAVTRLAGGM VAPAYGPDMS
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