Gene RPB_1983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1983 
Symbol 
ID3909488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2252409 
End bp2252978 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content54% 
IMG OID637883877 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_485602 
Protein GI86749106 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2184] Protein involved in cell division 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00370142 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGATG CGGTTGCCGA TCCGTATTGC TATCCCGGCA CCGCCGTTCT GAAGAACCTA 
CTCGATATTC GGGATCAGGC TACGCTCGAT CAGTACGAAG CTGAAGTGAC GGCAGCCAGG
GCCGAACAAC CATTTCCTTC TGGGAAGCTC GATACGGTGC ACTATTGCCG TTTTCACCAC
CATTTGTTTC AGGATGTGTT TGAGTGGGCT GGACGATATC GCACTGTCCG GATTGCTAAA
GGCGAGAATT ACTTCTGCTA TCCCGAGTAC ATTGCCGTGC AGATGAATCG TCTGTTTTCC
GATCTGCGCC GCAGCAATTT CTTCCAGGGC CAGTCCGCTA CAAAGTTCGC CGATACTGGA
GGACACTTTC TAGCAGAGCT CAATTCGATC CATCCTTTTC GCGAAGGCAA CGGACGCGCG
CAACTCGCGT TCTTCGCCCA TCTTGCAGAT CACGCGGGTC GCCCCCTGCA GTTGAAGCGG
TTAGACCCGG ATGTCTTTAT GACGGCGATG ATTGCGAGCT TCCTCGGTGA TGAGGCCCCT
CTAACGGAAG TGATCGCAGA CCTTCTGTAG
 
Protein sequence
MYDAVADPYC YPGTAVLKNL LDIRDQATLD QYEAEVTAAR AEQPFPSGKL DTVHYCRFHH 
HLFQDVFEWA GRYRTVRIAK GENYFCYPEY IAVQMNRLFS DLRRSNFFQG QSATKFADTG
GHFLAELNSI HPFREGNGRA QLAFFAHLAD HAGRPLQLKR LDPDVFMTAM IASFLGDEAP
LTEVIADLL