Gene RPB_1913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1913 
Symbol 
ID3907992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2186730 
End bp2187905 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content61% 
IMG OID637883807 
Producthypothetical protein 
Protein accessionYP_485532 
Protein GI86749036 
COG category[S] Function unknown 
COG ID[COG3825] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0562302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCTTC AATTCTTCAC GTCGCTGCGC GACGCTCAGG TCCCGGTCAC GCTCCGCGAA 
TATCTGACGC TGATGGAGGC GCTCGACGCC GATCTCGCGG ATCAGAGCGT GGAGAATTTC
TACTATCTGT CACGCGCCGC CCTGGTGAAG GACGAGCGCA ATCTCGATAA GTTCGATCGG
GTGTTCGGCA GCGTGTTCAA GGGGCTGGAG AATCTGCTCG ACGCCATGGA GAAGGCGGAG
ATTCCGGCCG AGTGGCTGAA AAAGCTGGCC GAGAAATATC TCACCGAGGA AGAGAAGAAG
CAGATCGAGG CGATGGGCTG GGACAAGCTC ATGGAGACGC TGAAGAAGCG CCTCGAGGAG
CAGAAGAAGC GACACCAGGG CGGCAACAAG TGGATCGGCA CCGCCGGAAC CTCGCCGTTC
GGCGCCGAGG GCTACAATCC GGAAGGCGTT CGGATCGGGC AGGAGAAGAG CCGCCATCAG
CGCGCGGTCA AGGTGTGGGA CAAGCGCGAG TTCAAGGATC TCGACGGCAA TGTCGAGCTC
GGCATCCGCA ACATCAAGGT GGCGCTACGC CGCCTGCGCA AATTCGCCCG CACCGGCGCG
CCGGACGAAC TCGATCTCGA CACCACGATC CGCGAAACCG CCAATCACGG ATATCTCGAC
GTGCACATGC GGCCGGAACG GCGCAACGCC GTCAAGGTGC TGGTGTTCTT CGACATCGGC
GGATCGATGG ATTCGCACGT CGCCCAGGTC GAGGAGCTGT TCTCGGCGGC GAAGAGCGAA
TTCAAGCACA TGGAATATTT CTACTTCCAC AACTGCCTCT ATGAAGGCGT GTGGAAGCAG
AACAAGCGGC GCTTCACCGA CCGCACGCCG ACCTGGGACG TGCTGCACAA ATTCCCGCAC
GACTACAAGG TCGTGTTCGT CGGCGACGCC TCGATGTCGC CTTACGAGAT CATGGTGCCG
GGCGGCTCGG TCGAGCACGT CAACGAGGAG GCCGGCTCGG TCTGGCTCGA CCGGGTACTG
CGGACCTATC CGCACGCCGT CTGGCTCAAT CCGGTGGCGC AGCGGCATTG GGACTACTCG
GAATCGACCA CGATCATTCG CCGCCTGTTC TCGGATCGGA TGTATCCGAT CACGATCGAG
GGCCTGGAAG GCGCGATGCG GGAGTTGGTT CGCTAA
 
Protein sequence
MFLQFFTSLR DAQVPVTLRE YLTLMEALDA DLADQSVENF YYLSRAALVK DERNLDKFDR 
VFGSVFKGLE NLLDAMEKAE IPAEWLKKLA EKYLTEEEKK QIEAMGWDKL METLKKRLEE
QKKRHQGGNK WIGTAGTSPF GAEGYNPEGV RIGQEKSRHQ RAVKVWDKRE FKDLDGNVEL
GIRNIKVALR RLRKFARTGA PDELDLDTTI RETANHGYLD VHMRPERRNA VKVLVFFDIG
GSMDSHVAQV EELFSAAKSE FKHMEYFYFH NCLYEGVWKQ NKRRFTDRTP TWDVLHKFPH
DYKVVFVGDA SMSPYEIMVP GGSVEHVNEE AGSVWLDRVL RTYPHAVWLN PVAQRHWDYS
ESTTIIRRLF SDRMYPITIE GLEGAMRELV R