Gene RPB_1868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1868 
Symbol 
ID3908063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2131316 
End bp2132029 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content72% 
IMG OID637883762 
Producturease accessory protein UreF 
Protein accessionYP_485487 
Protein GI86748991 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0830] Urease accessory protein UreF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.113809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0733507 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGAGG CGACCGCCGG GCCGCTGTCG GCGGAGCAGG GCGCGTCGCT GTATCGGCTG 
ATGACCTGGC TGTCGCCGGC GTTTCCGGTC GGTGCGTTTT CCTATTCCAG CGGCCTCGAA
TGGGCGGTCG AGGCCGGCGA CGTCGCCGAC GCGGCGTCCT TGCGCGACTG GCTCGGCGCG
ATGCTCGAAC ACGGCGCCGG CTTTTGCGAC GGTGTCTTCC TCGCGCAGGC CTATCGTGCG
GTCGAGGCCG GCGACGACGC GGCGCTGCGC GACGTCGCCG AACTTGCGGC CGCGATGGTG
CCCTCGGCCG AGCGCCATCT CGAAACCACG GCGCAGGGCA AGGCTTTCAT CGAGATCGTG
CGTCACGCCT GGGCCAGCGA CGGCCTCGCC CGCGCGGTGG GCGCCTGCAA CGGCGCGCTG
GCCTATCCGG TCGCGGTCGG CCTCGTCAGC GCGACGCATC GCGTGCCGTT GGCCGCGACG
CTGCACGCGT TTCTGCATGC GGTGGTCTCG AACTGGATTT CCGCCGGCGC GCGGCTGGTG
CCGCTCGGCC AGACCGACAG CCAGCGCCTG CTGGCCGCGC TCGAACCCGC CGTGATCGCC
ACCGGCGACC GCGCGTTGCG CGCCTCGCTC GACGATCTCG GTGGCGCCAC CTTCCGCGCC
GACCTCGCCA GTCTGCGCCA CGAGACGCAG TACACGCGGC TGTTCAGGTC GTAG
 
Protein sequence
MPEATAGPLS AEQGASLYRL MTWLSPAFPV GAFSYSSGLE WAVEAGDVAD AASLRDWLGA 
MLEHGAGFCD GVFLAQAYRA VEAGDDAALR DVAELAAAMV PSAERHLETT AQGKAFIEIV
RHAWASDGLA RAVGACNGAL AYPVAVGLVS ATHRVPLAAT LHAFLHAVVS NWISAGARLV
PLGQTDSQRL LAALEPAVIA TGDRALRASL DDLGGATFRA DLASLRHETQ YTRLFRS