Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1868 |
Symbol | |
ID | 3908063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 2131316 |
End bp | 2132029 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637883762 |
Product | urease accessory protein UreF |
Protein accession | YP_485487 |
Protein GI | 86748991 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0830] Urease accessory protein UreF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.113809 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0733507 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGAGG CGACCGCCGG GCCGCTGTCG GCGGAGCAGG GCGCGTCGCT GTATCGGCTG ATGACCTGGC TGTCGCCGGC GTTTCCGGTC GGTGCGTTTT CCTATTCCAG CGGCCTCGAA TGGGCGGTCG AGGCCGGCGA CGTCGCCGAC GCGGCGTCCT TGCGCGACTG GCTCGGCGCG ATGCTCGAAC ACGGCGCCGG CTTTTGCGAC GGTGTCTTCC TCGCGCAGGC CTATCGTGCG GTCGAGGCCG GCGACGACGC GGCGCTGCGC GACGTCGCCG AACTTGCGGC CGCGATGGTG CCCTCGGCCG AGCGCCATCT CGAAACCACG GCGCAGGGCA AGGCTTTCAT CGAGATCGTG CGTCACGCCT GGGCCAGCGA CGGCCTCGCC CGCGCGGTGG GCGCCTGCAA CGGCGCGCTG GCCTATCCGG TCGCGGTCGG CCTCGTCAGC GCGACGCATC GCGTGCCGTT GGCCGCGACG CTGCACGCGT TTCTGCATGC GGTGGTCTCG AACTGGATTT CCGCCGGCGC GCGGCTGGTG CCGCTCGGCC AGACCGACAG CCAGCGCCTG CTGGCCGCGC TCGAACCCGC CGTGATCGCC ACCGGCGACC GCGCGTTGCG CGCCTCGCTC GACGATCTCG GTGGCGCCAC CTTCCGCGCC GACCTCGCCA GTCTGCGCCA CGAGACGCAG TACACGCGGC TGTTCAGGTC GTAG
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Protein sequence | MPEATAGPLS AEQGASLYRL MTWLSPAFPV GAFSYSSGLE WAVEAGDVAD AASLRDWLGA MLEHGAGFCD GVFLAQAYRA VEAGDDAALR DVAELAAAMV PSAERHLETT AQGKAFIEIV RHAWASDGLA RAVGACNGAL AYPVAVGLVS ATHRVPLAAT LHAFLHAVVS NWISAGARLV PLGQTDSQRL LAALEPAVIA TGDRALRASL DDLGGATFRA DLASLRHETQ YTRLFRS
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