| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1855 |
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| Symbol | |
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| ID | 3908050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2120158 |
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| End bp | 2121504 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637883749 |
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| Product | three-deoxy-D-manno-octulosonic-acid transferase-like |
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| Protein accession | YP_485474 |
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| Protein GI | 86748978 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.123633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000681273 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACGAGCG CGTCACCTCC GCGGTGGCAG ACGGGGCCTT TGCTGGCCGA ACCGTTGCCG
ATGACGCTGC GCGTCTATCA GCAGCTCACC GCTGGTATCT CCCCGCTCGC CCCGCTGCTG
ATCCAGCGGC GGCTCAAGCA GGGCAAGGAA GAGCCGGCGC GGGTCGACGA GCGCCGCGGT
GTCGCCGCGC ATGTGCGGCC ACACGGACCG CTGGTGTGGA TCCACGGCGC CAGCGTCGGC
GAGGTGCTGG CCGCGGCCGG ACTGATCGAG CGGCTGCGCG CGCTCAACCT GCGCATCCTG
CTGACGTCCG GCACCGTGAC CTCGGCAGCC GTGGTGGCGA AACGGTTTCC GCCCGACATC
ATCCATCAGT TCATCCCCTA TGACGCGCCG CGCTTCGTCG CGCGCTTCCT CGATCACTGG
CAGCCGTCAT TGGCGCTGTT CGTCGAATCC GACCTGTGGC CGAATCTGAT CCTCGCCTCC
GCGGCGCGGC GGTTGCCGAT GGTGCTGATC AACGGCCGGA TGTCGCAGCG CTCGTTCCCG
CGCTGGCGGC GCGCCGCAGC GACGATCGGC ACGCTGCTCG GCAAGTTCGA CATCTGCCTC
GCGCAATCGC GGATGGACGC CGAGCGGTTC GCGGCGCTGG GCAGCCGCAA CGTCATCACC
ACCGGCAATC TCAAGATGGA CGTCGACCCC CCGCCGGGCG ATCCGGCGCG GCTGGAACGG
CTGATGGCGG TGACGCGCGG CCGGCAGGTG ATCGTCGCCG CCTCGACCCA TCCGGGCGAA
GAGGAGATCC TGCTCGACGT CCACCGCAGG CTTGCCGGGG CGTTCCCGGC GCTGCTCACC
GTGATCGTGC CGCGGCATCC GCATCGCGGC GAGCAGATCG CTGGCCTGAT TGAGGCCTCC
GGCCTGCACG CGGCGTTGCG CTCGCGCGAG CAACTGCCGA CCGCGGCGAC GGCGATCTAC
GTCGCCGACA CCATGGGCGA GCTCGGCCTA TTCTACCGGC TGGCGCCGAT CGTGTTCATG
GGCGGCTCGC TGATCGAGCA CGGCGGCCAG AATCCGATCG AGGCGGTCAA GCTCGGCGCC
TCGATCGTGC ACGGACCGCA CGTCTCCAAT TTCACCGACG TCTATCGCGC GCTCGACGAC
GAGGGCGGTG CCTTCACGGC GGCCGACGCC GACGCGCTGG TGCGGCGGTT CGGCCAGTTG
CTGTCCGACA GCAATGCGCG CCAGACCTCG ATCGATGCCG CCACCCGCGT GGTCGATCGG
CTCGGCGGCG CGCTGGACCG CACCGTCGCG GCGCTGGAAC CCTATCTGCT GCAATTGCGC
ATCGAGCAGG GCGCCGCCGG TGCGTGA
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| Protein sequence | MTSASPPRWQ TGPLLAEPLP MTLRVYQQLT AGISPLAPLL IQRRLKQGKE EPARVDERRG
VAAHVRPHGP LVWIHGASVG EVLAAAGLIE RLRALNLRIL LTSGTVTSAA VVAKRFPPDI
IHQFIPYDAP RFVARFLDHW QPSLALFVES DLWPNLILAS AARRLPMVLI NGRMSQRSFP
RWRRAAATIG TLLGKFDICL AQSRMDAERF AALGSRNVIT TGNLKMDVDP PPGDPARLER
LMAVTRGRQV IVAASTHPGE EEILLDVHRR LAGAFPALLT VIVPRHPHRG EQIAGLIEAS
GLHAALRSRE QLPTAATAIY VADTMGELGL FYRLAPIVFM GGSLIEHGGQ NPIEAVKLGA
SIVHGPHVSN FTDVYRALDD EGGAFTAADA DALVRRFGQL LSDSNARQTS IDAATRVVDR
LGGALDRTVA ALEPYLLQLR IEQGAAGA
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