| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1854 |
|---|
| Symbol | |
|---|
| ID | 3908049 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 2119896 |
|---|
| End bp | 2120141 |
|---|
| Gene Length | 246 bp |
|---|
| Protein Length | 81 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637883748 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_485473 |
|---|
| Protein GI | 86748977 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0677881 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.000466898 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGACA CTGCGCAGCA ATTGCTTCAT CTCGTCATCG GCGGCGAGCT CGAAGATCTC
GAGAACGTCA CCTTCCGCGA CCTCGACAAG GTGGACATCG TCGGGGTGTA TCCGAGCTAC
GCGTCGGCCT TCGCGGCGTG GAAGGCCAAG GCGCACCAGA CCGTCGACAA CGCCCATATG
CGCTACTTCA TCGTTCATCT CCATCGCCTG CTGGATCCCG GCCAGGACGC AAAGCTGGTA
AGTTGA
|
|---|
| Protein sequence | MPDTAQQLLH LVIGGELEDL ENVTFRDLDK VDIVGVYPSY ASAFAAWKAK AHQTVDNAHM
RYFIVHLHRL LDPGQDAKLV S
|
|---|
| |