Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1849 |
Symbol | ubiA |
ID | 3909008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 2115250 |
End bp | 2116200 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637883743 |
Product | 4-hydroxybenzoate polyprenyltransferase |
Protein accession | YP_485468 |
Protein GI | 86748972 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000654272 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACCGGCG TCCCGATCAG CGGCGCGACG GCGCCGGTTG CCGACTCGAC CGGCAACTGG GTCGACCGCC ACGCGCCGGA ATGGTCGCGG CCTTATCTCC GCCTCGCCCG GTTCGATCGT CCGATCGGTT CCTGGCTGCT GCTGATGCCA TGCTGGTGGT CGGCGGCGCT GGCGGCCGGC ATGGCCAAGG AGCTCGGCCA ACTGCCGCTG TTCTGCGCGC TGTTCTTCGT CGGCGCCTTC GTGATGCGCG GCGCCGGCTG CACCTGGAAC GACATCACCG ACCGCGATCT CGACGGCAAG GTCGAGCGCA CCCGGTCGCG GCCGATCCCG GCCGGCCAGG TCACCGCCAA GCAGGCCGCC GCCTTCATGG TGACGCTGTC CTTCATCGGC CTTGCGGTTC TTCTGCAGTT CAACAATTTC ACCATCGCGA CCGGCATCGC CTCGTTGATC ATCGTCGCCG CCTATCCGTT CATGAAGCGG ATCACCTACT GGCCGCAGAT CGTGCTCGGG CTCGCGTTCT CGTGGGGCGC GCTGATGGGC TTCGCCGGCA CGTTCGCGCG GCTCGATCTG GTGGCGTTCG TGCTCTATGC CGGCTCGATC GCCTGGGTGG TCGGCTACGA CACGATCTAC GCGCATCAGG ACGCCGAGGA CGATCTGATG ATCGGCATCA AGTCCACCGC GCTGCTGTTC GGCGACCGGA CCCACGCCGC GCTGCTGGTT CTCTACGGCC TCGCGGTGAC GCTGCTCGGC ACCGCCTTGC TGCTGGCGGA CTCCGGCTGG TTCGGCTGGA TCGGGCTCGC CGCCTTCACG GTGCATCTGG TGTCGCAGAT CGTCCGGCTC GACATCCACG ACAGCCCGCT GTGCCTGAAG CTGTTCAAGT CCAATCGCGA CGCCGGCCTG TTGCTGTTCA TCGGCCTGGC ATGCGATGCC GTCGCCCGGA CGATGACCTG A
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Protein sequence | MTGVPISGAT APVADSTGNW VDRHAPEWSR PYLRLARFDR PIGSWLLLMP CWWSAALAAG MAKELGQLPL FCALFFVGAF VMRGAGCTWN DITDRDLDGK VERTRSRPIP AGQVTAKQAA AFMVTLSFIG LAVLLQFNNF TIATGIASLI IVAAYPFMKR ITYWPQIVLG LAFSWGALMG FAGTFARLDL VAFVLYAGSI AWVVGYDTIY AHQDAEDDLM IGIKSTALLF GDRTHAALLV LYGLAVTLLG TALLLADSGW FGWIGLAAFT VHLVSQIVRL DIHDSPLCLK LFKSNRDAGL LLFIGLACDA VARTMT
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