| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1847 |
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| Symbol | |
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| ID | 3909006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2113572 |
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| End bp | 2114327 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637883741 |
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| Product | 16S ribosomal RNA methyltransferase RsmE |
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| Protein accession | YP_485466 |
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| Protein GI | 86748970 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000659643 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCCCGAT ACGAATTCCG AAGTCCCCGC CTCTTTCTCG ACGCTGCGCT CGTCGCCGGT
GCGCGGGTAC CGCTGAACCG CGACCAGAGC AATTATCTCG GCAATGTGCT GCGGCTCAGT
TCCGGTGCGC CGGTGCTGGC CTTCAACGGC CGCGACGGCG AGTGGCGCGC CGTGCTCGCC
GGCCGTAAGC GGCCGGAGGA ACTCGAGGTC GCCGAACAAA CCCGGCCGCA GGACCGCCTG
CCCGACCTGA CCTATGCGTT TGCGCCGCTG AAACACGCCC GGCTGGATTA TATGGCCCAG
AAAGCCGTCG AAATGGGCGC CGGGCGGCTG CAGCCGGTGC TGACGCGGCA CACCCAGGTG
CACCGGCTGA ATACCGAGCG GATGCGCGCC AATGTGATCG AGGCGGCCGA GCAGTGCGGC
ATCCTCAGCC TCGCCGGTGT CGAGGAACCG GTCGCGCTGG AGCGCTGGCT CGAGACCCGG
GCCGAAAGCG GTCGCCTGCT GGTGTTCTGC GACGAGGACG CCGAGGTCGC CGATCCGGTG
GCCGCGCTGC AGGGCGCCCG CCCCGCGGCG GCGCAGGGAA TCGACCTTCT GGTCGGCCCG
GAAGGCGGCT TTGCCGCCGA CGAGCGCGAC GTTTTGCTGC GCCAGCCGAA CATCCTGCGG
CTGGCGCTCG GCCCCCGCAT CATGCGCGCC GACACCGCCG CGGTCGCGGC CCTGGCGCTG
GTGCAGGCGG TGGCGGGGGA CTGGACCGGC CAATAG
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| Protein sequence | MSRYEFRSPR LFLDAALVAG ARVPLNRDQS NYLGNVLRLS SGAPVLAFNG RDGEWRAVLA
GRKRPEELEV AEQTRPQDRL PDLTYAFAPL KHARLDYMAQ KAVEMGAGRL QPVLTRHTQV
HRLNTERMRA NVIEAAEQCG ILSLAGVEEP VALERWLETR AESGRLLVFC DEDAEVADPV
AALQGARPAA AQGIDLLVGP EGGFAADERD VLLRQPNILR LALGPRIMRA DTAAVAALAL
VQAVAGDWTG Q
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