Gene RPB_1831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1831 
Symbol 
ID3908990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2094425 
End bp2095420 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content62% 
IMG OID637883725 
Producthypothetical protein 
Protein accessionYP_485450 
Protein GI86748954 
COG category 
COG ID 
TIGRFAM ID[TIGR02001] conserved hypothetical protein, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.281717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAA CAATTCTGTC GGTCGCGGCT GTGCTCGCTG TCGGCGTTAC CTCCGCCTCC 
GCCGCCGACC TGCCCGCCAA GGTCTACACC AAGGCTCCGC CGATCGTGGC GTTCGACCCC
TGGGACATCG CGTTCGGCAG CGCGATCATG AGCGACTACG TGTTCCGCGG CATCACCCAG
TCGAACCACA AGCCGTCGGT GAACGCCTAT TTCGAGCCGC GCTACAACGT CACCAAGGAC
CTGCAGCTCT ACGTCGGCAC CTCGTTCTCC AGCATCTCTT TCCCGAACCG CGCCGCTGCT
GAAGTCGATA TCTACGGCGG TATCCGGCCG ACCTTCGGCG CCTTCGCCTT CGACTTCGGT
GTGTTCGGCT ATCTGTATCC GGGCGGAACC TGCCAGTTCG GCGGCACCGG CACGGACAAC
ACCGGCCGCT TCTGGGGCTC CGACTGCGCG ACCAACGCGA TCTTCAACGG CAACGTGATG
AAGAAGGACG CGAGCTTCTT CGAGGGCTAC GCCAAGGTGA TGTGGACCGC GAACGAGATG
TTCTCGTTCG GCGCCAACGA ATACTACTCG CCGAACTTCT TGAACACCGG CGCCTGGGGC
AACTACGCAT CGGTGACCGC CAAGTACACC GCGCCGGCCA CGTATTTCGG CGGTGGCGTC
GGCATGTACA TCTCGGGTGA ATACGGCCAT CAGTGGTTCG GCACGTCCGA CTCGTTCTAC
GGCGTTCCGG CTTCGCCGTT CGGCATCAAG TACGCCGACT ACAACACCTG GAACGTCGGC
ATCGGCTTCA ACTACAAGGT GTTCACGCTC GACCTGCGCT ACTCGGACAC CGACCTGTCC
AAGGCGAACT GCAACGCCTT CACCAGCGAC TACACCGCCA CTCCGAGCGG CGACTTCTCC
CCGATCAATC CGTCGGGCGT CGGTTCGAAG TGGTGCGGTG CCACCTTCAT CGCCAAGCTG
TCGGCTGACC TGACGCTGAT GAGCAACATC AAGTAA
 
Protein sequence
MKKTILSVAA VLAVGVTSAS AADLPAKVYT KAPPIVAFDP WDIAFGSAIM SDYVFRGITQ 
SNHKPSVNAY FEPRYNVTKD LQLYVGTSFS SISFPNRAAA EVDIYGGIRP TFGAFAFDFG
VFGYLYPGGT CQFGGTGTDN TGRFWGSDCA TNAIFNGNVM KKDASFFEGY AKVMWTANEM
FSFGANEYYS PNFLNTGAWG NYASVTAKYT APATYFGGGV GMYISGEYGH QWFGTSDSFY
GVPASPFGIK YADYNTWNVG IGFNYKVFTL DLRYSDTDLS KANCNAFTSD YTATPSGDFS
PINPSGVGSK WCGATFIAKL SADLTLMSNI K