| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1827 |
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| Symbol | |
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| ID | 3908986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2088731 |
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| End bp | 2090224 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637883721 |
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| Product | FAD linked oxidase-like |
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| Protein accession | YP_485446 |
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| Protein GI | 86748950 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.049746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.441033 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATTC TGATGCCCGA GCCGGACCAG GCCGTGCTGG CGCGCCGCGA CGAGATCGTC
GCGAGCCTGC GCAAGATCGT GCCGGGCGAG GGCGTGATCT CCAGCGCCGC CGAAATGAAG
CCCTATGAGT CCGACGGGCT GATGGCGTAT CGGCAGCCGC CGATGGTGGT CGTGCTGCCC
GACACCACCA AGCAGGTTTC CGAAGTACTG CGCTATTGCC ACAAGAACGG CATCAAGGTG
GTGCCGCGCG GCTCCGGCAC GTCGCTGTCC GGCGGCGCGC TGCCGCTCGC CGACGGCGTG
CTGCTCGGCC TCGGCAAGTT CAAGCGGATC CGCGAGATCG ACTTCGACAA CCGCGCCGTC
GTGGTCGAGC CCGGCGTCAC CAATCTGGCG ATCAGTCAGG CGGTCGATCA TGCCGGCTTT
TACTACGCGC CCGACCCGTC GTCGCAGATC GCCTGCTCGA TCGGCGGCAA CATCGCCGAG
AATTCCGGCG GCGTGCATTG CCTGAAATAC GGCATGACCA CCAACAACGT GCTCGGCTGC
GAGATCGTGC TGATGACCGG CGAGATCCTG CGCATCGGCG GCAAGGCCGC CGAATGCGCG
GGTTACGACC TGATGGGCGT GATCACCGGC TCCGAAGGCC TGCTCGGCGT CATCACCGAA
GTCACCGTCC GCATCCTGCG CAAGCCGGAG ACGGCGCGGG CGCTGATGGT CGGCTTCACC
GACGTCGAGG CCGCCGGCCG ATGCGTCGCC GACGTGATCA GCGCCGGCAT CATTCCCGGC
GGCATGGAGA TGATGGACCG CCCCGCGATC CACGCCGCCG AAGCCTTCGT CCACGCCGGC
TATCCGCTCG ACGTCGAGGC GCTGCTGATC ATCGAGCTCG ACGGCCCGCA AGTCGAGGTC
GACGAACTGA TCACCCGCGT AGAGGCGATC GCGCTCGGCT GCGGCTCGAC CACCTGCCAG
ATCTCGACGT CGGAACAGGA GCGGCTGCTG TTCTGGTCCG GCCGCAAGGC CGCGTTTCCG
GCAGTCGGCC GGATCTCGCC GGACTATCTG TGCATGGACG GCACCATTCC GCGCGCGCAA
CTGCCGCTGG TGCTGCGGCG GATGACGCAG ATGTCGGAAA AATACGGGCT GCGCGTCGCC
AATGTGTTTC ACGCCGGTGA CGGCAATCTT CACCCTCTCA TCCTGTACGA CGCCAACAAG
CCCGGCGAGC AGGACAGGGC GGAGGCGTTC GGCGCCGACA TCCTGCGGCT GTGCGTCGAG
GTCGGCGGCG TGCTGACCGG CGAGCATGGG GTCGGCATCG AGAAACGCGA CCTGATGCCG
GAGATGTTCT CCGATATCGA TCTCAATCAG CAGCAGCGAT TGAAATGCGC GTTCGATTCC
GAGGGCCTGC TCAATCCCGG CAAGGTGTTT CCGACGCTGC ACCGCTGTGC CGAGCTCGGC
CGCATGCACG TCCACGGCGG CAAATTGCCA TTCCCGGATA TTCCGCGGTT TTGA
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| Protein sequence | MTILMPEPDQ AVLARRDEIV ASLRKIVPGE GVISSAAEMK PYESDGLMAY RQPPMVVVLP
DTTKQVSEVL RYCHKNGIKV VPRGSGTSLS GGALPLADGV LLGLGKFKRI REIDFDNRAV
VVEPGVTNLA ISQAVDHAGF YYAPDPSSQI ACSIGGNIAE NSGGVHCLKY GMTTNNVLGC
EIVLMTGEIL RIGGKAAECA GYDLMGVITG SEGLLGVITE VTVRILRKPE TARALMVGFT
DVEAAGRCVA DVISAGIIPG GMEMMDRPAI HAAEAFVHAG YPLDVEALLI IELDGPQVEV
DELITRVEAI ALGCGSTTCQ ISTSEQERLL FWSGRKAAFP AVGRISPDYL CMDGTIPRAQ
LPLVLRRMTQ MSEKYGLRVA NVFHAGDGNL HPLILYDANK PGEQDRAEAF GADILRLCVE
VGGVLTGEHG VGIEKRDLMP EMFSDIDLNQ QQRLKCAFDS EGLLNPGKVF PTLHRCAELG
RMHVHGGKLP FPDIPRF
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