| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1812 |
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| Symbol | tolB |
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| ID | 3908893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2071433 |
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| End bp | 2072782 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637883706 |
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| Product | translocation protein TolB |
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| Protein accession | YP_485431 |
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| Protein GI | 86748935 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.431319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.360787 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTGCC CGAACATGCC GCTCCACATC AATCGTAGAC AAATGCTCCT CTCCGCCGCG
ACTGCCGCGG GCGCGCTGGC GCTCGGACCG GCGCGCGACG CGTTCGGCCA GGCCCGCGTG
CAGATCACCG AGGGCAACGT CGCGCCGCTG CCGATCGCGA TCCCGAATTT CGTCGCCGGC
ACGCCGTCGG ACAATGAAGT CGGCGGCGGC GTCGCCCAGG TCATCACCAA CAATCTCAAG
CGCAGCGGCC TGTTCGCGCC GATCGACCAG GCCGCCTATG TCGAGAAGAT CACCAACATC
GACGTGCCGC CGCAATTCAA GAGCTGGACC AGCATCAACG CCCAGGCGCT GGTGACCGGC
CGGATGACGC GGCAGTCGGA CGGGCGGCTG AAGGCCGAAT TCCGGCTGTG GGACGTCGCC
ACCGGCCAGC AGCTCGCCGG CCAGCAATAC TTCACCTCGC CGGAATATTG GCGCCGCATC
GCCCACATCA TTTCCGATCA GATCTACGAG CGGCTGACCG GCGAGAAGGG TTACTTCGAC
AGCCGCGTGG TGTTCATCGA CGAGAGCGGC CCGGCGGACC GCCGCGTCAA GCGGCTGGCG
CTGATGGATC AGGACGGCGC CAATGTCCGC TACCTCACGC GCGGCAGCGA CCTGGTGCTG
ACGCCGCGGT TCTCGCCGTC GACCCAGGAA ATCACCTATA TGGAGTTCGG CCAGGGCGAC
CCGAAGGTCT ATCTGTTCAA CATCGAGACC GGGCAGCGCG AGATCGTCGG CAATTTCCCC
GGCATGTCGT TTGCGCCGCG CTTCTCGCCG GACGGCCAGC GCATCATCAT GAGCCTGCAG
CAGGGCGGCA ATTCGAACCT GTTCGTGATG GATCTCCGCT CCAAATCGAC GACGCGGCTG
ACCGACACGC CGGCGATCGA CACCTCGCCG TCCTACTCGC CCGACGCCGC GCGGATCTGC
TTCGAGTCCG ATCGCGGCGG CAAGCCGCAG ATCTATGTGA TGCCGGCCAG CGGCGGGCAG
GCGCAGCGCA TCTCGTTCGG CGACGGCAGC TACTCGACCC CGGTGTGGTC GCCGCGCGGC
GACTACATCG CCTTCACCAA GCAGGGCGGC GGTCAGTTCG CGATCGGCAT CATGAAGCCG
GACGGCTCCG GCGAGCGCAT CCTGACCTCG GGCTTCCACA ACGAAGGGCC GACCTTCGCC
CCCAACGGTC GGGTGCTGAT GTTCTTCCGC GATCCCGGCG GCAATGCCGG CCCGTCGCTG
TTCACCGTCG ACGTCTCCGG GCGCAACGAA CTGCGCGTTC CGACGCCCGG CTACGCCTCG
GACCCGGCCT GGTCGCCGCT GCTGTCGTAA
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| Protein sequence | MDCPNMPLHI NRRQMLLSAA TAAGALALGP ARDAFGQARV QITEGNVAPL PIAIPNFVAG
TPSDNEVGGG VAQVITNNLK RSGLFAPIDQ AAYVEKITNI DVPPQFKSWT SINAQALVTG
RMTRQSDGRL KAEFRLWDVA TGQQLAGQQY FTSPEYWRRI AHIISDQIYE RLTGEKGYFD
SRVVFIDESG PADRRVKRLA LMDQDGANVR YLTRGSDLVL TPRFSPSTQE ITYMEFGQGD
PKVYLFNIET GQREIVGNFP GMSFAPRFSP DGQRIIMSLQ QGGNSNLFVM DLRSKSTTRL
TDTPAIDTSP SYSPDAARIC FESDRGGKPQ IYVMPASGGQ AQRISFGDGS YSTPVWSPRG
DYIAFTKQGG GQFAIGIMKP DGSGERILTS GFHNEGPTFA PNGRVLMFFR DPGGNAGPSL
FTVDVSGRNE LRVPTPGYAS DPAWSPLLS
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