Gene RPB_1802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1802 
Symbol 
ID3908883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2062707 
End bp2063243 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content68% 
IMG OID637883696 
Productmetal dependent phosphohydrolase 
Protein accessionYP_485421 
Protein GI86748925 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.293843 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC TCGTTCTCGT CTCCCGCGCC GCCGATTTCG CCGCGCGGTG CCATGCCGGG 
CAGCGCCGCA AGGGCGCGGC GAAGGAGCCC TACGTCAATC ATCTCGCCGA AGTCGCCGAG
CTGCTGGCGG TGGCGACCGA CGGCTCCGAC GCAGCGCTGG TCGCGGCCGG CTGGCTGCAC
GACACCGTCG AGGATTCCGG CACGACCCGC GACGAATTGA TCGAGCAGTT CGGCGACGAC
GTCGCCGCGC TGGTGATCGA ATGCACCGAC GACAAGACGT TGCCGAAGGC CGAGCGCAAG
CGGCTGCAGA TCGAGCACGC GCCGCATCTG AGCGGCCGGG CGCGGATGGT CAAGCTCGCC
GACAAGATCA GCAATCTGCG TTCGCTGATC TTCTCGCCGC CCGACGATTG GGAGCGCGAG
CGGCTGATCG ACTATCTCGA TTGGGCCGAC CGGGTCGTCG CCGGCTGCCG CGGCGTCAAC
GGTTATCTCG AACGCATCTA CGACGAAACC GCCTCGTCCG GGAGGGCCGT GTTGTGA
 
Protein sequence
MTDLVLVSRA ADFAARCHAG QRRKGAAKEP YVNHLAEVAE LLAVATDGSD AALVAAGWLH 
DTVEDSGTTR DELIEQFGDD VAALVIECTD DKTLPKAERK RLQIEHAPHL SGRARMVKLA
DKISNLRSLI FSPPDDWERE RLIDYLDWAD RVVAGCRGVN GYLERIYDET ASSGRAVL